RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 EPB41L5Q9HCM4 733 aa16.2■□□□□ 0.18
COL7A1-204ENST00000462475 TENM4Q6N022 2769 aa16.2■□□□□ 0.18
COL7A1-204ENST00000462475 LRP4O75096 1905 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 KIF26BQ2KJY2 2108 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 A0A1W2PQM1 296 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 TMEM202A6NGA9 273 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 ARHGAP42A6NI28 874 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 LRRC10BA6NIK2 292 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 TMCO5BA8MYB1 307 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 K7ENP7 123 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 EEF2KO00418 725 aaKnown RBP16.19■□□□□ 0.18
COL7A1-204ENST00000462475 PALMO75781 387 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 RECQL5O94762 991 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-204ENST00000462475 RPLP0P05388 317 aaKnown RBP16.19■□□□□ 0.18
COL7A1-204ENST00000462475 DESP17661 470 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 SERPINA4P29622 427 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 MLLT3P42568 568 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-204ENST00000462475 LY6DQ14210 128 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 STX1AQ16623 288 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 AFMIDQ63HM1 303 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 INO80CQ6PI98 192 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-204ENST00000462475 RFX8Q6ZV50 586 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 IRF2BP2Q7Z5L9 587 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 SFTPA2Q8IWL1 248 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 FUBP1Q96AE4 644 aaKnown RBP16.19■□□□□ 0.18
COL7A1-204ENST00000462475 ECHDC3Q96DC8 303 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 CCDC97Q96F63 343 aaPredicted RBP16.19■□□□□ 0.18
COL7A1-204ENST00000462475 WBP1Q96G27 269 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 NSMCE3Q96MG7 304 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 RBM15Q96T37 977 aaKnown RBP eCLIP16.19■□□□□ 0.18
COL7A1-204ENST00000462475 TRIM7Q9C029 511 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 FGF22Q9HCT0 170 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 ANO10Q9NW15 660 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 DONSONQ9NYP3 566 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 PCSK1NQ9UHG2 260 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 DGKBQ9Y6T7 804 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 LRRK1Q38SD2 2015 aa16.19■□□□□ 0.18
COL7A1-204ENST00000462475 DFFAO00273 331 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 PLD2O14939 933 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 TNFP01375 233 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 ATP1A3P13637 1013 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 HGFP14210 728 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 GM2AP17900 193 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 ERCC2P18074 760 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 CSNK1DP48730 415 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 KIAA1024LP59773 190 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 KIAA1614Q5VZ46 1190 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 PLEKHA7Q6IQ23 1121 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 SASS6Q6UVJ0 657 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 CYP4V2Q6ZWL3 525 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-204ENST00000462475 TP53INP2Q8IXH6 220 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 ATL2Q8NHH9 583 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 CINPQ9BW66 212 aaPredicted RBP16.18■□□□□ 0.18
COL7A1-204ENST00000462475 SP110Q9HB58 689 aa16.18■□□□□ 0.18
COL7A1-204ENST00000462475 MRPL40Q9NQ50 206 aaKnown RBP16.18■□□□□ 0.18
COL7A1-204ENST00000462475 CFAP69A5D8W1 941 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 DAPK3O43293 454 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 ELFN1P0C7U0 828 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 CDK11BP21127 795 aaKnown RBP16.17■□□□□ 0.18
COL7A1-204ENST00000462475 TNFAIP3P21580 790 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 UGT1A5P35504 534 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 INHBCP55103 352 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 BCL2L1Q07817 233 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 ZSCAN23Q3MJ62 389 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 PPP6R3Q5H9R7 873 aaPredicted RBP16.17■□□□□ 0.18
COL7A1-204ENST00000462475 ERMARDQ5T6L9 678 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 LIPIQ6XZB0 460 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 DPPA4Q7L190 304 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 RAB11FIP2Q7L804 512 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 PELI3Q8N2H9 469 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 FBXO39Q8N4B4 442 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 GPR156Q8NFN8 814 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 OR56A4Q8NGH8 313 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 LRRN3Q9H3W5 708 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 PARVAQ9NVD7 372 aa16.17■□□□□ 0.18
COL7A1-204ENST00000462475 TMEM191CA6NGB0 347 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 A8MX80 341 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 EIF3CLB5ME19 914 aaKnown RBP16.16■□□□□ 0.18
COL7A1-204ENST00000462475 CACNB4O00305 520 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-204ENST00000462475 TRAFD1O14545 582 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-204ENST00000462475 TEX33O43247 280 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 NOBOXO60393 691 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 CCDC172P0C7W6 258 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 MIPP30301 263 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 SLC5A2P31639 672 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 CCKBRP32239 447 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 EIF3IQ13347 325 aaKnown RBP16.16■□□□□ 0.18
COL7A1-204ENST00000462475 CCDC81Q6ZN84 652 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 TAF8Q7Z7C8 310 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 CCNJLQ8IV13 435 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 AOPEPQ8N6M6 819 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 PAF1Q8N7H5 531 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 Q8N9G6 341 aaPredicted RBP16.16■□□□□ 0.18
COL7A1-204ENST00000462475 FAM46DQ8NEK8 389 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 CCL4L1Q8NHW4 92 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 EIF3CQ99613 913 aaKnown RBP16.16■□□□□ 0.18
COL7A1-204ENST00000462475 LGR4Q9BXB1 951 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 STRADBQ9C0K7 418 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 TMEM168Q9H0V1 697 aa16.16■□□□□ 0.18
COL7A1-204ENST00000462475 WDR70Q9NW82 654 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms