RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 SPTBN4Q9H254 2564 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 PCDH15Q96QU1 1955 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 PLXNA2O75051 1894 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 GOLGA6L3A6NEY3 463 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 FADS2P1A8MWK0 482 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 TNFRSF10CO14798 259 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 BUB1BO60566 1050 aaPredicted RBP5.86□□□□□ -1.47
VPS36-202ENST00000462289 ATG13O75143 517 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 CLEC3AO75596 197 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 RNF8O76064 485 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 MOCS2O96007 188 aaPredicted RBP5.86□□□□□ -1.47
VPS36-202ENST00000462289 PEX11BO96011 259 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 SYPP08247 313 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 NTSR1P30989 418 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 PTPN7P35236 360 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 CSKP41240 450 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 NBL1P41271 181 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 IL12RB1P42701 662 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 MAGEA1P43355 309 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 PEX5P50542 639 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 DGKEP52429 567 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 COPAP53621 1224 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 TAS2R40P59535 323 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 ARF5P84085 180 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 SRSF3P84103 164 aaKnown RBP5.86□□□□□ -1.47
VPS36-202ENST00000462289 SATB1Q01826 763 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 CLCQ05315 142 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 SULT2A1Q06520 285 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 DPYSL3Q14195 570 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 ZNF234Q14588 700 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 SSPNQ14714 243 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 SLC14A2Q15849 920 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 CDO1Q16878 200 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 ANO4Q32M45 955 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 HNRNPA1L2Q32P51 320 aaKnown RBP5.86□□□□□ -1.47
VPS36-202ENST00000462289 PITRM1Q5JRX3 1037 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 EMC10Q5UCC4 262 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 DAB2IPQ5VWQ8 1189 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 MBLAC2Q68D91 279 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 RFX8Q6ZV50 586 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 TRMT11Q7Z4G4 463 aaKnown RBP5.86□□□□□ -1.47
VPS36-202ENST00000462289 MFN1Q8IWA4 741 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 APCDD1Q8J025 514 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 CFAP52Q8N1V2 620 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 NPWQ8N729 165 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 PQLC3Q8N755 202 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 ZNF513Q8N8E2 541 aaPredicted RBP5.86□□□□□ -1.47
VPS36-202ENST00000462289 NAT16Q8N8M0 369 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 TTC8Q8TAM2 541 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 ARHGEF2Q92974 986 aaKnown RBP5.86□□□□□ -1.47
VPS36-202ENST00000462289 ISG20Q96AZ6 181 aaKnown RBP5.86□□□□□ -1.47
VPS36-202ENST00000462289 TBC1D31Q96DN5 1066 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 SIGLEC10Q96LC7 697 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 RPRD1AQ96P16 312 aaPredicted RBP5.86□□□□□ -1.47
VPS36-202ENST00000462289 CSPG4P5Q96PW8 444 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 PPP1R9BQ96SB3 815 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 ACOX2Q99424 681 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 PLCD4Q9BRC7 762 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 MAGEH1Q9H213 219 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 DEF6Q9H4E7 631 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 PCDH18Q9HCL0 1135 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 KCND1Q9NSA2 647 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 PRR13Q9NZ81 148 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 UBP1Q9NZI7 540 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 MPP6Q9NZW5 540 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 TNFRSF10DQ9UBN6 386 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 NDRG2Q9UN36 371 aaKnown RBP5.86□□□□□ -1.47
VPS36-202ENST00000462289 EFR3BQ9Y2G0 817 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 PCDHGA2Q9Y5H1 932 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 DUSP10Q9Y6W6 482 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 CFAP54Q96N23 3096 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 DMXL1Q9Y485 3027 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 CACNA1AO00555 2505 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 SCN8AQ9UQD0 1980 aa5.86□□□□□ -1.47
VPS36-202ENST00000462289 A0A0D9SEW6 157 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 A0A0U1RQJ8 604 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 FAM170AA1A519 330 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 TARSL2A2RTX5 802 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 TYW5A2RUC4 315 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 GRID2IPA4D2P6 1211 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 TBC1D3BA6NDS4 549 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 WASH3PC4AMC7 463 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ALOX15BO15296 676 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 PSTPIP1O43586 416 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 PRPSAP2O60256 369 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 TSPAN3O60637 253 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 KRT7P08729 469 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 SP9P0CG40 484 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 NME1P15531 152 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 GOT1P17174 413 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 ENDOUP21128 410 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 PRKCHP24723 683 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 CTNNA2P26232 953 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 VIPR1P32241 457 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 CTNNA1P35221 906 aaKnown RBP5.85□□□□□ -1.47
VPS36-202ENST00000462289 ETFBP38117 255 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 CXCL12P48061 93 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 NDST2P52849 883 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 KRT83P78385 493 aa5.85□□□□□ -1.47
VPS36-202ENST00000462289 GNA12Q03113 381 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms