RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 ZBED1O96006 694 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 IGLV3-19P01714 112 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 SERPING1P05155 500 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 ACADMP11310 421 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 RHOQP17081 205 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 DESP17661 470 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 CHRNB2P17787 502 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 TNFAIP3P21580 790 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 GPD2P43304 727 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 ACADSBP45954 432 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 KIF11P52732 1056 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 C21orf59P57076 290 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 CCDC15Q0P6D6 951 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 BNIP3Q12983 259 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 PDCLQ13371 301 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 CUL3Q13618 768 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 STARD3Q14849 445 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 NAA25Q14CX7 972 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 SHBQ15464 509 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 SNCBQ16143 134 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 ANO4Q32M45 955 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 TDRD12Q587J7 1177 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 RAB41Q5JT25 222 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 NAA35Q5VZE5 725 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 GRAMD4Q6IC98 578 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 CAPRIN2Q6IMN6 1127 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 PMF1Q6P1K2 205 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 USP53Q70EK8 1073 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 IRF2BP2Q7Z5L9 587 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 VPS36Q86VN1 386 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 PTRH1Q86Y79 214 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 TMEM25Q86YD3 366 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 CNGA4Q8IV77 575 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 ARHGAP18Q8N392 663 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 C1orf131Q8NDD1 294 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 TRIM58Q8NG06 486 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 CPA5Q8WXQ8 436 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 OVCA2Q8WZ82 227 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 PRCCQ92733 491 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 SYN2Q92777 582 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 GAL3ST3Q96A11 431 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 BIRC7Q96CA5 298 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 HSFY1Q96LI6 401 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 CCNL2Q96S94 520 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 NAP1L3Q99457 506 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 ELF4Q99607 663 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 TTLL2Q9BWV7 592 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 MAK16Q9BXY0 300 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 ULBP1Q9BZM6 244 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 MIS12Q9H081 205 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 PCED1AQ9H1Q7 454 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 MMADHCQ9H3L0 296 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 HAUS4Q9H6D7 363 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 RUBCNLQ9H714 662 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 ACTR5Q9H9F9 607 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 CNGB3Q9NQW8 809 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 ZNHIT6Q9NWK9 470 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 IL37Q9NZH6 218 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 VPS18Q9P253 973 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 SCML2Q9UQR0 700 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 TMEM98Q9Y2Y6 226 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 DYRK1BQ9Y463 629 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 BZW2Q9Y6E2 419 aaKnown RBP6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 STON1Q9Y6Q2 735 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 ZFHX3Q15911 3703 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 KIF26BQ2KJY2 2108 aa6.11□□□□□ -1.43
SMARCC1-204ENST00000462198 RP1L1Q8IWN7 2480 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 A0A1W2PQH9 124 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 FAM92AA1XBS5 289 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 AKR1B15C9JRZ8 316 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 E5RJQ4 531 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 VILLO15195 856 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 HOXC11O43248 304 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 SART1O43290 800 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 MFAP3LO75121 409 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 TPPPO94811 219 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 FBXO21O94952 628 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 ATE1O95260 518 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 CYP1A1P04798 512 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 RALAP11233 206 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 IDO1P14902 403 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 ACP1P24666 158 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 MCM3P25205 808 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 CD27P26842 260 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 RBMS1P29558 406 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 ACSL1P33121 698 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 CDH5P33151 784 aaPredicted RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 PRKCIP41743 596 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 NSFP46459 744 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 PAPOLAP51003 745 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 ADKP55263 362 aaKnown RBP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 YWHAGP61981 247 aaKnown RBP eCLIP6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 VSNL1P62760 191 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 NOMO3P69849 1222 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 FMO1Q01740 532 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 GOLGA8FQ08AF8 430 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 GOLGA8DPQ0D2H9 430 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 SKIDA1Q1XH10 827 aa6.1□□□□□ -1.43
SMARCC1-204ENST00000462198 HECTD3Q5T447 861 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms