RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TCF4P15884 667 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 TSHRP16473 764 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 PTMSP20962 102 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 TRIM23P36406 574 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 EIF2S3P41091 472 aaKnown RBP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 RPIAP49247 311 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 SCNN1BP51168 640 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 HK3P52790 923 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 ADKP55263 362 aaKnown RBP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 SLC25A11Q02978 314 aaKnown RBP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 RALGDSQ12967 914 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 MTM1Q13496 603 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 INPP5AQ14642 412 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 NFATC4Q14934 902 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 TDRD12Q587J7 1177 aaKnown RBP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 PRRT3Q5FWE3 981 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 C6orf132Q5T0Z8 1188 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 CFAP58Q5T655 872 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 FAXCQ5TGI0 409 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 TXNRD3NBQ6F5E7 133 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 ALKBH5Q6P6C2 394 aaKnown RBP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 TMCO3Q6UWJ1 677 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 LIPIQ6XZB0 460 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 DPPA4Q7L190 304 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 PDZD3Q86UT5 571 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 RBFAQ8N0V3 343 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 ATL2Q8NHH9 583 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 SNIP1Q8TAD8 396 aaKnown RBP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 IFI44Q8TCB0 444 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 HNRNPLLQ8WVV9 542 aaKnown RBP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 FGF11Q92914 225 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 GLMNQ92990 594 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 DEPDC7Q96QD5 511 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 NUDCD1Q96RS6 583 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 CLPBQ9H078 707 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 THAP2Q9H0W7 228 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 PCDH18Q9HCL0 1135 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 ETNK2Q9NVF9 386 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 KCTD5Q9NXV2 234 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 APOBEC3BQ9UH17 382 aaKnown RBP9.21□□□□□ -0.94
BRCA1-207ENST00000461798 COQ6Q9Y2Z9 468 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 AK5Q9Y6K8 562 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 DGKBQ9Y6T7 804 aa9.21□□□□□ -0.94
BRCA1-207ENST00000461798 GOLGA6L19H0YKK7 550 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 MYO1FO00160 1098 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 TNFRSF10CO14798 259 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 TLX3O43711 291 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-207ENST00000461798 RECQL5O94762 991 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-207ENST00000461798 RASGRP1O95267 797 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 GYPCP04921 128 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 ANXA6P08133 673 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 ALPIP09923 528 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 GM2AP17900 193 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 HTR1BP28222 390 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 SERPINB6P35237 376 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 ACTN2P35609 894 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 LSSP48449 732 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 ARSEP51690 589 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 CDH6P55285 790 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 KIAA1024LP59773 190 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 C1orf61Q13536 156 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 ELOCQ15369 112 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 NR0B2Q15466 257 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 ALG11Q2TAA5 492 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 SMTNL2Q2TAL5 461 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 DEFB133Q30KQ1 61 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 CCDC122Q5T0U0 273 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 GUSBP11Q6P575 273 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 IGF2-ASQ6U949 168 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 EFL1Q7Z2Z2 1120 aaKnown RBP9.2□□□□□ -0.94
BRCA1-207ENST00000461798 SLC35F3Q8IY50 421 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 LSMEM2Q8N112 164 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 PGBD5Q8N414 524 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 TEX26Q8N6G2 289 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 WDR48Q8TAF3 677 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 MAPK15Q8TD08 544 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 CPLX3Q8WVH0 158 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 HSPH1Q92598 858 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 NAT6Q93015 286 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 FATE1Q969F0 183 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 MGME1Q9BQP7 344 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 NUP85Q9BW27 656 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 ABCG4Q9H172 646 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 IFNKQ9P0W0 207 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 ANAPC7Q9UJX3 599 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 PPIL1Q9Y3C6 166 aa9.2□□□□□ -0.94
BRCA1-207ENST00000461798 ASXL3Q9C0F0 2248 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 CPED1A4D0V7 1026 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 BRINP1O60477 761 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 CSO75390 466 aaKnown RBP9.19□□□□□ -0.94
BRCA1-207ENST00000461798 TCEA3O75764 348 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 TNFP01375 233 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 PRKCGP05129 697 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 TGM2P21980 687 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 KELP23276 732 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 CASP14P31944 242 aa9.19□□□□□ -0.94
BRCA1-207ENST00000461798 SRP54P61011 504 aaKnown RBP9.19□□□□□ -0.94
BRCA1-207ENST00000461798 SEMG2Q02383 582 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms