RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 NME1P15531 152 aaKnown RBP13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 ITGB6P18564 788 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 AKT2P31751 481 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 CHRNA3P32297 505 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 MAGEA1P43355 309 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 PAPOLAP51003 745 aaKnown RBP13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 NFATC3Q12968 1075 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 CYTH1Q15438 398 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 CARD16Q5EG05 197 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 KYAT3Q6YP21 454 aaKnown RBP13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 ZSCAN30Q86W11 494 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 HORMAD1Q86X24 394 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 ZNF548Q8NEK5 533 aaPredicted RBP13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 WDR36Q8NI36 951 aaKnown RBP13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 PCDH19Q8TAB3 1148 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 HSPH1Q92598 858 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 ATXN7L3BQ96GX2 97 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 LIN37Q96GY3 246 aaPredicted RBP13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 HDAC8Q9BY41 377 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 TNKS2Q9H2K2 1166 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 LHX3Q9UBR4 397 aa13.8□□□□□ -0.2
SCAMP4-206ENST00000460767 CCDC187A0A096LP49 1063 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 H3BM21 787 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 AMPD1P23109 780 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 CCNHP51946 323 aaPredicted RBP13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 PDX1P52945 283 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 INHBCP55103 352 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 MMRN1Q13201 1228 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 PAFAH1B3Q15102 231 aaKnown RBP13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 PDK2Q15119 407 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 HADHQ16836 314 aaKnown RBP13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 ACCSLQ4AC99 568 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 TMEM259Q4ZIN3 620 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 ARHGAP36Q6ZRI8 547 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 PQLC3Q8N755 202 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 OR2AP1Q8NGE2 309 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 SPOCK2Q92563 424 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 RAPGEF5Q92565 580 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 ARRDC3Q96B67 414 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 CELF6Q96J87 481 aaKnown RBP13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 TBATAQ96M53 351 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 CALN1Q9BXU9 219 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 TFR2Q9UP52 801 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 HS3ST3A1Q9Y663 406 aa13.79□□□□□ -0.2
SCAMP4-206ENST00000460767 ANKRD36A6QL64 1941 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 TDRD6O60522 2096 aaKnown RBP13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 SPTY2D1-AS1A0A0U1RR47 76 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 A0A1W2PQU0 124 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 SLC31A1O15431 190 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 SPINT1O43278 529 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 EFSO43281 561 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 BUB1BO60566 1050 aaPredicted RBP13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 MAFKO60675 156 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 LEFTY1O75610 366 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 PRNPP04156 253 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 KRT7P08729 469 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 CYLC1P35663 651 aaPredicted RBP13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 ARL4AP40617 200 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 SLC1A1P43005 524 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 CDH6P55285 790 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 IL10RBQ08334 325 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 EIF3IQ13347 325 aaKnown RBP13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 MESDQ14696 234 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 POM121L1PQ3SYA9 428 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 ANKRD20A8PQ5CZ79 823 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 NCBP2-AS2Q69YL0 99 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 PARGQ86W56 976 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 NAT6Q93015 286 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 FATE1Q969F0 183 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 NSMCE3Q96MG7 304 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 ZNF599Q96NL3 588 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 BAG1Q99933 345 aaPredicted RBP13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 HEPHQ9BQS7 1158 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 TRIM4Q9C037 500 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 LACRTQ9GZZ8 138 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 IL36AQ9UHA7 158 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 HPCAL4Q9UM19 191 aa13.78□□□□□ -0.2
SCAMP4-206ENST00000460767 TSPAN11A1L157 253 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 ARHGAP42A6NI28 874 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 BUB1O43683 1085 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 PRLRP16471 622 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 CR2P20023 1033 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 KDELR1P24390 212 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 ITGB7P26010 798 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 CSNK1DP48730 415 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 FZD2Q14332 565 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 RFTN1Q14699 578 aaPredicted RBP13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 MYLK3Q32MK0 819 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 ARSIQ5FYB1 569 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 SLC9A4Q6AI14 798 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 C11orf63Q6NUN7 778 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 GUSBP11Q6P575 273 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 TMCO3Q6UWJ1 677 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 EFL1Q7Z2Z2 1120 aaKnown RBP13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 NETO2Q8NC67 525 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 CCDC114Q96M63 670 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 PSKH2Q96QS6 385 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 BOCQ9BWV1 1114 aa13.77□□□□□ -0.21
SCAMP4-206ENST00000460767 TRPM6Q9BX84 2022 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms