RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 CFAP69A5D8W1 941 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 TLR4O00206 839 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 SLC31A1O15431 190 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 CAPNS1P04632 268 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 ITGAVP06756 1048 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 STIP1P31948 543 aaKnown RBP15.74■□□□□ 0.11
SDF4-204ENST00000459994 COILP38432 576 aaPredicted RBP15.74■□□□□ 0.11
SDF4-204ENST00000459994 CLCN6P51797 869 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 CCNHP51946 323 aaPredicted RBP15.74■□□□□ 0.11
SDF4-204ENST00000459994 SLC20A2Q08357 652 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 FGL2Q14314 439 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 ZNF284Q2VY69 593 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 RETSATQ6NUM9 610 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 DARS2Q6PI48 645 aaKnown RBP15.74■□□□□ 0.11
SDF4-204ENST00000459994 ARHGAP36Q6ZRI8 547 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 KANSL1Q7Z3B3 1105 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 PRPF39Q86UA1 669 aaKnown RBP15.74■□□□□ 0.11
SDF4-204ENST00000459994 KDF1Q8NAX2 398 aaPredicted RBP15.74■□□□□ 0.11
SDF4-204ENST00000459994 ATL2Q8NHH9 583 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 SAP25Q8TEE9 199 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 MAML1Q92585 1016 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 RUNDC3BQ96NL0 473 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 SP110Q9HB58 689 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 PDFQ9HBH1 243 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 FEZ2Q9UHY8 353 aaPredicted RBP15.74■□□□□ 0.11
SDF4-204ENST00000459994 GGT7Q9UJ14 662 aa15.74■□□□□ 0.11
SDF4-204ENST00000459994 GOLGA4Q13439 2230 aaKnown RBP15.74■□□□□ 0.11
SDF4-204ENST00000459994 CTAGE15A4D2H0 777 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 J3KR12 359 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 TAF4O00268 1085 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 MATN3O15232 486 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 SPINT1O43278 529 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 TRIM16O95361 564 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 PEX11BO96011 259 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 CTAGE8P0CG41 777 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 GEMIN4P57678 1058 aaKnown RBP15.73■□□□□ 0.11
SDF4-204ENST00000459994 AP1B1Q10567 949 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 DNAJC3Q13217 504 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 SNX1Q13596 522 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 RFTN1Q14699 578 aaPredicted RBP15.73■□□□□ 0.11
SDF4-204ENST00000459994 INO80DQ53TQ3 878 aaPredicted RBP15.73■□□□□ 0.11
SDF4-204ENST00000459994 CCDC157Q569K6 752 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 CARD16Q5EG05 197 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 ATXN7L2Q5T6C5 722 aaPredicted RBP15.73■□□□□ 0.11
SDF4-204ENST00000459994 TMCO4Q5TGY1 634 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 TTC27Q6P3X3 843 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 ERN2Q76MJ5 926 aaKnown RBP15.73■□□□□ 0.11
SDF4-204ENST00000459994 PARS2Q7L3T8 475 aaKnown RBP15.73■□□□□ 0.11
SDF4-204ENST00000459994 CTAGE6Q86UF2 777 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 ZNF354CQ86Y25 554 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 CTAGE4Q8IX94 777 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 PCDH20Q8N6Y1 951 aaKnown RBP15.73■□□□□ 0.11
SDF4-204ENST00000459994 MFSD2AQ8NA29 543 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 TMEM145Q8NBT3 493 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 CASKIN2Q8WXE0 1202 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 FERMT1Q9BQL6 677 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 ZDHHC6Q9H6R6 413 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 USP29Q9HBJ7 922 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 PREBQ9HCU5 417 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 ZNF148Q9UQR1 794 aa15.73■□□□□ 0.11
SDF4-204ENST00000459994 APOBEC2Q9Y235 224 aaKnown RBP15.73■□□□□ 0.11
SDF4-204ENST00000459994 ZZEF1O43149 2961 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 LRP4O75096 1905 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 SDC3O75056 442 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 PRNPP04156 253 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 RBL1P28749 1068 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 EPHA8P29322 1005 aaPredicted RBP15.72■□□□□ 0.11
SDF4-204ENST00000459994 ABL2P42684 1182 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 GRK6P43250 576 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 CLDN2P57739 230 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 IFI35P80217 286 aaPredicted RBP15.72■□□□□ 0.11
SDF4-204ENST00000459994 SUZ12Q15022 739 aaKnown RBP15.72■□□□□ 0.11
SDF4-204ENST00000459994 LRRC73Q5JTD7 316 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 CCDC137Q6PK04 289 aaKnown RBP15.72■□□□□ 0.11
SDF4-204ENST00000459994 GCNT7Q6ZNI0 430 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 HORMAD1Q86X24 394 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 TEX26Q8N6G2 289 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 EID2Q8N6I1 236 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 NSMCE1Q8WV22 266 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 HTR3CQ8WXA8 447 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 ZCCHC14Q8WYQ9 949 aaKnown RBP15.72■□□□□ 0.11
SDF4-204ENST00000459994 SLCO2A1Q92959 643 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 RTP4Q96DX8 246 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 CCDC114Q96M63 670 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 VAT1Q99536 393 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 IL12RB2Q99665 862 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 HEPHQ9BQS7 1158 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 HDAC8Q9BY41 377 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 CEP44Q9C0F1 390 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 DDX47Q9H0S4 455 aaKnown RBP15.72■□□□□ 0.11
SDF4-204ENST00000459994 RRAGDQ9NQL2 400 aaPredicted RBP15.72■□□□□ 0.11
SDF4-204ENST00000459994 GDF3Q9NR23 364 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 HECAQ9UBI9 543 aaPredicted RBP15.72■□□□□ 0.11
SDF4-204ENST00000459994 UBA2Q9UBT2 640 aaPredicted RBP15.72■□□□□ 0.11
SDF4-204ENST00000459994 PCYOX1Q9UHG3 505 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 ITM2BQ9Y287 266 aa15.72■□□□□ 0.11
SDF4-204ENST00000459994 FARP1Q9Y4F1 1045 aaPredicted RBP15.72■□□□□ 0.11
SDF4-204ENST00000459994 COL27A1Q8IZC6 1860 aaPredicted RBP15.71■□□□□ 0.11
SDF4-204ENST00000459994 DMXL2Q8TDJ6 3036 aa15.71■□□□□ 0.11
SDF4-204ENST00000459994 FAM149AA5PLN7 773 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms