RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 SMPD3Q9NY59 655 aaPredicted RBP9.8□□□□□ -0.84
UFD1-205ENST00000459854 RPS6KB2Q9UBS0 482 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.8□□□□□ -0.84
UFD1-205ENST00000459854 DNM1LO00429 736 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 GPR182O15218 404 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 PRKD3O94806 890 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 ZNF865P0CJ78 1059 aaPredicted RBP9.8□□□□□ -0.84
UFD1-205ENST00000459854 AVPR1AP37288 418 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 ECT2LQ008S8 904 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 BST2Q10589 180 aaKnown RBP9.8□□□□□ -0.84
UFD1-205ENST00000459854 PAGE2BQ5JRK9 111 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 GJB7Q6PEY0 223 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 FAM131AQ6UXB0 335 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 SVOPLQ8N434 492 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 SPATA5L1Q9BVQ7 753 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 ARPC4-TTLL3A0A0A6YYG9 625 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 E2F8A0AVK6 867 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 CHST10O43529 356 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 TULP3O75386 442 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 H6PDO95479 791 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 PEPDP12955 493 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 NCAM1P13591 858 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 IDO1P14902 403 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 SSTR1P30872 391 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 GLRBP48167 497 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 CDH4P55283 916 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 VEPH1Q14D04 833 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 ZNF829Q3KNS6 432 aaPredicted RBP9.8□□□□□ -0.84
UFD1-205ENST00000459854 TAPT1Q6NXT6 567 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 TDRPQ86YL5 185 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 TLCD1Q96CP7 247 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 MID1IP1Q9NPA3 183 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 KLHL1Q9NR64 748 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 TRPM5Q9NZQ8 1165 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 SIK3Q9Y2K2 1263 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 DYRK1BQ9Y463 629 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 SHBGP04278 402 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 ITGALP20701 1170 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 DPYSL3Q14195 570 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 GNA13Q14344 377 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 ZBED5Q49AG3 693 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 P2RY8Q86VZ1 359 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 OR2T34Q8NGX1 318 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 OR2T3Q8NH03 318 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 EMID1Q96A84 441 aaPredicted RBP9.8□□□□□ -0.84
UFD1-205ENST00000459854 PPP3R2Q96LZ3 170 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 CLPBQ9H078 707 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 FETUBQ9UGM5 382 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 USP20Q9Y2K6 914 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 FOCADQ5VW36 1801 aa9.8□□□□□ -0.84
UFD1-205ENST00000459854 H3BN98 237 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 CPSF4O95639 269 aaKnown RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 CYP1A2P05177 515 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 RARRES1P49788 294 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 RGS7P49802 495 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 ARPP19P56211 112 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 RPL19P84098 196 aaKnown RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 DCAF4L1Q3SXM0 396 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 CCDC28AQ8IWP9 274 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 DCP1BQ8IZD4 617 aaKnown RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 CAMKK1Q8N5S9 505 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 CYP4F12Q9HCS2 524 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 PCDH12Q9NPG4 1184 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 TAS2R13Q9NYV9 303 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 CDH22Q9UJ99 828 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 LSM7Q9UK45 103 aaKnown RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 RBM47A0AV96 593 aaKnown RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 TEX46H3BTG2 121 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 ACADLP28330 430 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 SMAD1Q15797 465 aaKnown RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 MOGQ16653 247 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 QPCTQ16769 361 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 CMPK2Q5EBM0 449 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 FAM43BQ6ZT52 329 aaPredicted RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 MPP5Q8N3R9 675 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 PHF12Q96QT6 1004 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 SH2D3AQ9BRG2 576 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 DENND2DQ9H6A0 471 aaPredicted RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 AP4E1Q9UPM8 1137 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 RBAK-RBAKDNI3L0D1 243 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 KPNA5O15131 536 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 PGRMC2O15173 223 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 PTX3P26022 381 aaPredicted RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 MAPK10P53779 464 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 TPTEP56180 551 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 PTSQ03393 145 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 GIT2Q14161 759 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 PCSK7Q16549 785 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 LIPMQ5VYY2 423 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 USP43Q70EL4 1123 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 ZNF410Q86VK4 478 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 OFCC1Q8IZS5 231 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 HTR3CQ8WXA8 447 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 RFT1Q96AA3 541 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 NXNL1Q96CM4 212 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 CINPQ9BW66 212 aaPredicted RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 C1QTNF1Q9BXJ1 281 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 POMKQ9H5K3 350 aa9.79□□□□□ -0.84
UFD1-205ENST00000459854 CCDC177Q9NQR7 707 aaPredicted RBP9.79□□□□□ -0.84
UFD1-205ENST00000459854 ARL8BQ9NVJ2 186 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms