RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 HOXD3P31249 432 aaPredicted RBP3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 TTKP33981 857 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 CENPAP49450 140 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 NUDT6P53370 316 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 LTBQ06643 244 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 FAM27E3Q08E93 113 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 CAPSQ13938 189 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 CTTNQ14247 550 aaKnown RBP3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 TAF12Q16514 161 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 WDR45BQ5MNZ6 344 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 CYP26C1Q6V0L0 522 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 MOB3CQ70IA8 216 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 IQCF1Q8N6M8 205 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 CLEC18CQ8NCF0 446 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 MYRIPQ8NFW9 859 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 ELP5Q8TE02 316 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 SH3KBP1Q96B97 665 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 ELP4Q96EB1 424 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 PHF21BQ96EK2 531 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 NTPCRQ9BSD7 190 aaKnown RBP3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 BABAM1Q9NWV8 329 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 RRN3Q9NYV6 651 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 IFT80Q9P2H3 777 aaPredicted RBP3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 LRP12Q9Y561 859 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 TTC21BQ7Z4L5 1316 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 ADGRF5Q8IZF2 1346 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 NSD3Q9BZ95 1437 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 ADGRL3Q9HAR2 1447 aa3.84□□□□□ -1.79
SSX2IP-204ENST00000459708 IQSEC2Q5JU85 1478 aa3.84□□□□□ -1.8
SSX2IP-204ENST00000459708 NALCNQ8IZF0 1738 aa3.84□□□□□ -1.8
SSX2IP-204ENST00000459708 XRN1Q8IZH2 1706 aaKnown RBP3.84□□□□□ -1.8
SSX2IP-204ENST00000459708 KIF20BQ96Q89 1820 aa3.84□□□□□ -1.8
SSX2IP-204ENST00000459708 C17orf113A0A1B0GUU1 675 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 C4orf47A7E2U8 309 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 EBAG9O00559 213 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 TIMM23O14925 209 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 ITM2AO43736 263 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 KIF1CO43896 1103 aaKnown RBP3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 POLBP06746 335 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 HSD3B1P14060 373 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 CHRNDQ07001 517 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 TBL3Q12788 808 aaKnown RBP3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 NCAPH2Q6IBW4 605 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 RETSATQ6NUM9 610 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 C8orf82Q6P1X6 216 aaPredicted RBP3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 IL20RBQ6UXL0 311 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 MON1BQ7L1V2 547 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 ADGRG6Q86SQ4 1221 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 PATL1Q86TB9 770 aaKnown RBP3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 DENND6AQ8IWF6 608 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 CPXM2Q8N436 756 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 MCPH1Q8NEM0 835 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 TMEM170AQ8WVE7 144 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 RUFY2Q8WXA3 655 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 RNF183Q96D59 192 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 MED30Q96HR3 178 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 YME1L1Q96TA2 773 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 CD180Q99467 661 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 SEZ6LQ9BYH1 1024 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 GPR63Q9BZJ6 419 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 TAOK3Q9H2K8 898 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 CLK4Q9HAZ1 481 aaKnown RBP3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 SPATS2LQ9NUQ6 558 aaKnown RBP3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 TMEM160Q9NX00 188 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 KIF16BQ96L93 1317 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 FANCIQ9NVI1 1328 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 NWD1Q149M9 1564 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 NRKQ7Z2Y5 1582 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 CEP170BQ9Y4F5 1589 aaPredicted RBP3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 C3P01024 1663 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 AKAP12Q02952 1782 aa3.83□□□□□ -1.8
SSX2IP-204ENST00000459708 KIF1AQ12756 1690 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 OVOS2A0A0G2JMS6 1433 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 MAPK8IP3Q9UPT6 1336 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 IGHV4-28A0A0C4DH34 117 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 LINC01553A4QN01 128 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 TCERG1O14776 1098 aaKnown RBP3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 ASAP2O43150 1006 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 HTATSF1O43719 755 aaKnown RBP3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 ATP2C2O75185 946 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 NAGAP17050 411 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 CCT5P48643 541 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 AMTP48728 403 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 CXCR3P49682 368 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 PDLIM4P50479 330 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 BLKP51451 505 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 CLCN5P51795 746 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 EFNA5P52803 228 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 TRAF3Q13114 568 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 BIRC3Q13489 604 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 LPIN1Q14693 890 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 ALDH1L2Q3SY69 923 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 PRSS45Q7RTY3 260 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 FJX1Q86VR8 437 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 LURAP1LQ8IV03 231 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 OR14A16Q8NHC5 309 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 MORC4Q8TE76 937 aa3.82□□□□□ -1.8
SSX2IP-204ENST00000459708 TMEM51Q9NW97 253 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms