RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 KDM7AQ6ZMT4 941 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 BAHD1Q8TBE0 780 aaPredicted RBP20.85■□□□□ 0.93
VARS-218ENST00000459667 IL12RB2Q99665 862 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 MBNL1Q9NR56 388 aaKnown RBP20.85■□□□□ 0.93
VARS-218ENST00000459667 B4GALT6Q9UBX8 382 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 RAI2Q9Y5P3 530 aa20.85■□□□□ 0.93
VARS-218ENST00000459667 NCOR2Q9Y618 2525 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 A0A0U1RQJ8 604 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 GRID2IPA4D2P6 1211 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 CFAP69A5D8W1 941 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 PGLSO95336 258 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 JCHAINP01591 159 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 NFKBIAP25963 317 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 NR2C2P49116 596 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 PFN3P60673 137 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 BNIP3Q12983 259 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 PDE1CQ14123 709 aaPredicted RBP20.84■□□□□ 0.93
VARS-218ENST00000459667 LRRC14Q15048 493 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 IRF4Q15306 451 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 PPP2R5EQ16537 467 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 LIPIQ6XZB0 460 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 BZW1Q7L1Q6 419 aaKnown RBP20.84■□□□□ 0.93
VARS-218ENST00000459667 LRRC57Q8N9N7 239 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 ARRDC2Q8TBH0 407 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 BRD8Q9H0E9 1235 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 SAE1Q9UBE0 346 aaPredicted RBP20.84■□□□□ 0.93
VARS-218ENST00000459667 TRIM10Q9UDY6 481 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 PHTF1Q9UMS5 762 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 PCDHA3Q9Y5H8 950 aa20.84■□□□□ 0.93
VARS-218ENST00000459667 SPTY2D1-AS1A0A0U1RR47 76 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 CCDC66A2RUB6 948 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 A8MX80 341 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 SDC3O75056 442 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 PECAM1P16284 738 aaPredicted RBP20.83■□□□□ 0.93
VARS-218ENST00000459667 CTNNA2P26232 953 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 ADCY2Q08462 1091 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 AGERQ15109 404 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 WSCD2Q2TBF2 565 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 CDC6Q99741 560 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 CEP41Q9BYV8 373 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 TSGA10Q9BZW7 698 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 SEPT10Q9P0V9 454 aa20.83■□□□□ 0.93
VARS-218ENST00000459667 PDHA1P08559 390 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 CYP2A6P11509 494 aaPredicted RBP20.82■□□□□ 0.92
VARS-218ENST00000459667 CA4P22748 312 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 PMLP29590 882 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 VIPR1P32241 457 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 THOP1P52888 689 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 NIPAL4Q0D2K0 466 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 FZD2Q14332 565 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 IHHQ14623 411 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 TPRG1LQ5T0D9 272 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 USP45Q70EL2 814 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 B4GALNT4Q76KP1 1039 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 PARGQ86W56 976 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 CNTD1Q8N815 330 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 PIH1D2Q8WWB5 315 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 P3H4Q92791 437 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 HAUS1Q96CS2 278 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 IFT43Q96FT9 208 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 TDRD1Q9BXT4 1180 aaKnown RBP20.82■□□□□ 0.92
VARS-218ENST00000459667 DNAJC28Q9NX36 388 aa20.82■□□□□ 0.92
VARS-218ENST00000459667 TOR1BO14657 336 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 FZD6O60353 706 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 RECQL5O94762 991 aaPredicted RBP20.81■□□□□ 0.92
VARS-218ENST00000459667 RWDD2BP57060 319 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 COPS2P61201 443 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 YPEL5P62699 121 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 FOXC1Q12948 553 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 PTK2BQ14289 1009 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 PRKD1Q15139 912 aaPredicted RBP20.81■□□□□ 0.92
VARS-218ENST00000459667 CNGA3Q16281 694 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 BBS12Q6ZW61 710 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 KANSL1Q7Z3B3 1105 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 GLRX5Q86SX6 157 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 NT5DC3Q86UY8 548 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 LRRC8AQ8IWT6 810 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 SYCE1Q8N0S2 351 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 NDUFAF2Q8N183 169 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 SCRN2Q96FV2 425 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 MCCC1Q96RQ3 725 aaPredicted RBP20.81■□□□□ 0.92
VARS-218ENST00000459667 HEMGNQ9BXL5 484 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 FTSJ1Q9UET6 329 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 AMFRQ9UKV5 643 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 CHKBQ9Y259 395 aa20.81■□□□□ 0.92
VARS-218ENST00000459667 NPIPB15A6NHN6 443 aaPredicted RBP20.8■□□□□ 0.92
VARS-218ENST00000459667 HEXIM1O94992 359 aaKnown RBP20.8■□□□□ 0.92
VARS-218ENST00000459667 PCCBP05166 539 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 FTH1P19P0C7X4 201 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 CTPS1P17812 591 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 CD86P42081 329 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 PEX5P50542 639 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 EPHB1P54762 984 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 ACOX1Q15067 660 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 ZNF542PQ5EBM4 170 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 FAM182AQ5T1J6 154 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 PEX26Q7Z412 305 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 ZC3H18Q86VM9 953 aaKnown RBP20.8■□□□□ 0.92
VARS-218ENST00000459667 EID2Q8N6I1 236 aa20.8■□□□□ 0.92
VARS-218ENST00000459667 TFB1MQ8WVM0 346 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms