RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 FANCGO15287 622 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 KCNN4O15554 427 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 LIASO43766 372 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 MMP20O60882 483 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 LRP3O75074 770 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 MT-CYBP00156 380 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 PRKCGP05129 697 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 ZNF806P0C7X5 589 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 PRLRP16471 622 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 MAT2AP31153 395 aaKnown RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 STIP1P31948 543 aaKnown RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 HOXD12P35452 270 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 MPLP40238 635 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 DPP6P42658 865 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 RPS21P63220 83 aaKnown RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 SPEM2Q0P670 501 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 ELP6Q0PNE2 266 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 FGL2Q14314 439 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 SLC14A2Q15849 920 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 CCDC6Q16204 474 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 CCNG2Q16589 344 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 HS1BP3Q53T59 392 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 ANKRD20A2Q5SQ80 823 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 ARMC12Q5T9G4 340 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 ANKRD20A1Q5TYW2 823 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 ANKRD20A3Q5VUR7 823 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 PAPD7Q5XG87 772 aaKnown RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 SEL1L3Q68CR1 1132 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 DRICH1Q6PGQ1 229 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 GPR161Q8N6U8 529 aaKnown RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 SPATA22Q8NHS9 363 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 PDCD6IPQ8WUM4 868 aaKnown RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 C1orf54Q8WWF1 131 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 ATG4AQ8WYN0 398 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 KLK6Q92876 244 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 SCRN2Q96FV2 425 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 MS4A14Q96JA4 679 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 TMEM121Q9BTD3 319 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 C1QTNF2Q9BXJ5 285 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 TDRD1Q9BXT4 1180 aaKnown RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 SLC17A9Q9BYT1 436 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 SMOC1Q9H4F8 434 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 KLHL8Q9P2G9 620 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 SNX12Q9UMY4 172 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 DRG1Q9Y295 367 aaKnown RBP10.11□□□□□ -0.79
ATG4A-206ENST00000457035 PCDH15Q96QU1 1955 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 CACNA1AO00555 2505 aa10.11□□□□□ -0.79
ATG4A-206ENST00000457035 LOC285095A0A1B0GVY8 99 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 DCDC2BA2VCK2 349 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 CFAP69A5D8W1 941 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 IGLON5A6NGN9 336 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 PATE3B3GLJ2 98 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 ANKRD66B4E2M5 251 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 CES2O00748 559 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 NEMP1O14524 444 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 BCAT2O15382 392 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-206ENST00000457035 SLC31A1O15431 190 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 GCATO75600 419 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 ZNF189O75820 626 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-206ENST00000457035 PAK4O96013 591 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-206ENST00000457035 NFKB1P19838 968 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 XPAP23025 273 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-206ENST00000457035 NUDT1P36639 197 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 MMP12P39900 470 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 GDF10P55107 478 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 RPL26P61254 145 aaKnown RBP10.1□□□□□ -0.79
ATG4A-206ENST00000457035 FAM193AP78312 1265 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 IRX4P78413 519 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 SEMG2Q02383 582 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 LMNB2Q03252 620 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 RALGDSQ12967 914 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 PTPRRQ15256 657 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 CSRP2Q16527 193 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 DUOXA1Q1HG43 343 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 LONRF2Q1L5Z9 754 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 CFAP58Q5T655 872 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 KIAA1161Q6NSJ0 714 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 ERAP2Q6P179 960 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 SLC23A3Q6PIS1 610 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 KDELC1Q6UW63 502 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 LIPIQ6XZB0 460 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 DPPA4Q7L190 304 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 ZSCAN30Q86W11 494 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 PRELID2Q8N945 189 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 FAM71DQ8N9W8 422 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 CEP76Q8TAP6 659 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 CCDC110Q8TBZ0 833 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 ACTRT1Q8TDG2 376 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 MAIP1Q8WWC4 291 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 ASB12Q8WXK4 309 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 SNX19Q92543 992 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 RTP4Q96DX8 246 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 OXNAD1Q96HP4 312 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-206ENST00000457035 SPATA13Q96N96 652 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 SMIM14Q96QK8 99 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 MCCC1Q96RQ3 725 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-206ENST00000457035 TRIB3Q96RU7 358 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 KLF6Q99612 283 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-206ENST00000457035 FERMT1Q9BQL6 677 aa10.1□□□□□ -0.79
ATG4A-206ENST00000457035 GORASP1Q9BQQ3 440 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms