RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 LIN52Q52LA3 116 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 ZNF789Q5FWF6 425 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 CUZD1Q86UP6 607 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 RHEBL1Q8TAI7 183 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 DCUN1D1Q96GG9 259 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 UHRF1Q96T88 793 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 CENPKQ9BS16 269 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SLC25A23Q9BV35 468 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 MRPL1Q9BYD6 325 aaKnown RBP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 NT5MQ9NPB1 228 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 INPP5FQ9Y2H2 1132 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 VWA8A3KMH1 1905 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 TANC1Q9C0D5 1861 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SMIM31A0A1B0GVY4 71 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 CCDC78A2IDD5 438 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 BBIP1A8MTZ0 92 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 AURKAO14965 403 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 RTN3O95197 1032 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 CCDC166P0CW27 439 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 HAPLN1P10915 354 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 KCNA5P22460 613 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 CTGFP29279 349 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 CD86P42081 329 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SH3BGRP55822 239 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 PSME3P61289 254 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 FOLH1Q04609 750 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SLC10A7Q0GE19 358 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 MMEL1Q495T6 779 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SIRPB2Q5JXA9 342 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 ZNF678Q5SXM1 525 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 NXNQ6DKJ4 435 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SLC30A9Q6PML9 568 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 LARP4Q71RC2 724 aaKnown RBP eCLIP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 ISCA2Q86U28 154 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 COLGALT2Q8IYK4 626 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 TMEM102Q8N9M5 508 aaPredicted RBP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 TRIB2Q92519 343 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 MOCOSQ96EN8 888 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 SPATA17Q96L03 361 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 CD300AQ9UGN4 299 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 PADI4Q9UM07 663 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 PCDHB5Q9Y5E4 795 aa12.57□□□□□ -0.4
ECHDC1-209ENST00000454591 TCRBV3S1A0A5B6 114 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 OR6C75A6NL08 312 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 TMEM233B4DJY2 109 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 J3KR12 359 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 UBDO15205 165 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 PRAMEF11O60813 436 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 DNAJA2O60884 412 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 MOCS2O96007 188 aaPredicted RBP12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 ASGR1P07306 291 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 SLC10A3P09131 477 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 ZDHHC11BP0C7U3 371 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 CD9P21926 228 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 KPNA1P52294 538 aaPredicted RBP12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 PGGT1BP53609 377 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 DSC2Q02487 901 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 SMARCB1Q12824 385 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 TRIM25Q14258 630 aaKnown RBP12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 TYSND1Q2T9J0 566 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 UGT3A2Q3SY77 523 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 CWF19L1Q69YN2 538 aaKnown RBP12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 GLB1LQ6UWU2 654 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 CYHR1Q6ZMK1 362 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 AHI1Q8N157 1196 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 PGBD5Q8N414 524 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 GOLM1Q8NBJ4 401 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 HASPINQ8TF76 798 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 ROPN1LQ96C74 230 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 LRGUKQ96M69 825 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 CEP295NLQ96MC4 621 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 SPATA16Q9BXB7 569 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 ZNF696Q9H7X3 374 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 SP110Q9HB58 689 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 PAPOLBQ9NRJ5 636 aaKnown RBP12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 CACNA2D2Q9NY47 1150 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 GTSE1Q9NYZ3 720 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 TRAF6Q9Y4K3 522 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 THSD7BQ9C0I4 1608 aa12.56□□□□□ -0.4
ECHDC1-209ENST00000454591 NEMP2A6NFY4 417 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 PSMD12O00232 456 aaPredicted RBP12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 FBP2O00757 339 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 B4GALT3O60512 393 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 SNRPB2P08579 225 aaKnown RBP12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 ENO3P13929 434 aaPredicted RBP12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 YY1P25490 414 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 ERFP50548 548 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 ARSDP51689 593 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 CDKN2DP55273 166 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 C1QTNF8P60827 252 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 HERVK_113P63132 956 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 TIAL1Q01085 375 aaKnown RBP eCLIP12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 RHDQ02161 417 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 FASTKQ14296 549 aaKnown RBP12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 GRAMD1BQ3KR37 738 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 UNC50Q53HI1 259 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 ALFQ53S48 1182 aa12.55□□□□□ -0.4
ECHDC1-209ENST00000454591 COQ5Q5HYK3 327 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms