RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 HDAC8Q9BY41 377 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 GBA3Q9H227 469 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 CAPN10Q9HC96 672 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 TMEM9BQ9NQ34 198 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 DKK3Q9UBP4 350 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 FAM153AQ9UHL3 310 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 SARDHQ9UL12 918 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 FZD4Q9ULV1 537 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 TPX2Q9ULW0 747 aaKnown RBP9.25□□□□□ -0.93
RFX3-207ENST00000449190 PCDHGC4Q9Y5F7 938 aa9.25□□□□□ -0.93
RFX3-207ENST00000449190 DOCK4Q8N1I0 1966 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 GON4LQ3T8J9 2241 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 RALGAPA1Q6GYQ0 2036 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 A0A1W2PP55 124 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 LNP1A1A4G5 178 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 DCDC2BA2VCK2 349 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 LRRC72A6NJI9 287 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 C4orf47A7E2U8 309 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 F5H423 210 aaPredicted RBP9.24□□□□□ -0.93
RFX3-207ENST00000449190 PMPCBO75439 489 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 ECEL1O95672 775 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 CPP00450 1065 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 KRT14P02533 472 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 CFIP05156 583 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 ENGP17813 658 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 CD68P34810 354 aaPredicted RBP9.24□□□□□ -0.93
RFX3-207ENST00000449190 NEK3P51956 506 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 RPL26P61254 145 aaKnown RBP9.24□□□□□ -0.93
RFX3-207ENST00000449190 SKOR1P84550 965 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 CNTN1Q12860 1018 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 MPP3Q13368 585 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 SLC14A2Q15849 920 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 PCSK7Q16549 785 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 KIAA0895LQ68EN5 471 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 ALG1LQ6GMV1 187 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 SYDE1Q6ZW31 735 aaPredicted RBP9.24□□□□□ -0.93
RFX3-207ENST00000449190 MAATS1Q7Z4T9 603 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 SPATA4Q8NEY3 305 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 OR2T34Q8NGX1 318 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 OR14C36Q8NHC7 312 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 C1orf216Q8TAB5 229 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 ARRDC2Q8TBH0 407 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 CCHCR1Q8TD31 782 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 WNT2BQ93097 391 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 ARRDC3Q96B67 414 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 FSD1LQ9BXM9 530 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 ZDHHC5Q9C0B5 715 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 DDX47Q9H0S4 455 aaKnown RBP9.24□□□□□ -0.93
RFX3-207ENST00000449190 KDM4CQ9H3R0 1056 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 C6orf106Q9H6K1 298 aaPredicted RBP9.24□□□□□ -0.93
RFX3-207ENST00000449190 PCDH9Q9HC56 1237 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 UBP1Q9NZI7 540 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 EIF2B4Q9UI10 523 aaKnown RBP9.24□□□□□ -0.93
RFX3-207ENST00000449190 PHTF1Q9UMS5 762 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 RPL26L1Q9UNX3 145 aaKnown RBP9.24□□□□□ -0.93
RFX3-207ENST00000449190 PCDHB9Q9Y5E1 797 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 CKAP5Q14008 2032 aa9.24□□□□□ -0.93
RFX3-207ENST00000449190 PLXND1Q9Y4D7 1925 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TBC1D3DA0A087WVF3 549 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TBC1D3IA0A087WXS9 549 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TBC1D3EA0A087X179 549 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TBC1D3KA0A087X1G2 549 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 CTAGE15A4D2H0 777 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TBC1D3FA6NER0 549 aaPredicted RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 FAM47DPA6NHR8 397 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 C10orf142B7Z368 130 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TBC1D3LB9A6J9 549 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 PDE2AO00408 941 aaPredicted RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 FANCGO15287 622 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 BCAT2O15382 392 aaPredicted RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 HTRA2O43464 458 aaPredicted RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 FSBPO95073 299 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 PCDH8O95206 1070 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 PGLSO95336 258 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TBC1D3HP0C7X1 549 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 CTAGE8P0CG41 777 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 CYP2A6P11509 494 aaPredicted RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 TIMP2P16035 220 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 CD27P26842 260 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 PSMB4P28070 264 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 RPL22P35268 128 aaKnown RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 ADCY8P40145 1251 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 CCR5P51681 352 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 ATXN3P54252 364 aaPredicted RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 GDF10P55107 478 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 WNT3AP56704 352 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 FAM193AP78312 1265 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 SARNPP82979 210 aaKnown RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 DR1Q01658 176 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 CDK18Q07002 472 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 ELP6Q0PNE2 266 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TRAF2Q12933 501 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 DHX34Q14147 1143 aaKnown RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 TBC1D3GQ6DHY5 549 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TBC1D3CQ6IPX1 549 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 TTC27Q6P3X3 843 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 USP45Q70EL2 814 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 KDELC2Q7Z4H8 507 aa9.23□□□□□ -0.93
RFX3-207ENST00000449190 PRPF39Q86UA1 669 aaKnown RBP9.23□□□□□ -0.93
RFX3-207ENST00000449190 CTAGE6Q86UF2 777 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms