RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 L7N2F9 121 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CNTN5O94779 1100 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 TSPAN12O95859 305 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ZDHHC11BP0C7U3 371 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ANXA3P12429 323 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ALOX12P18054 663 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 NR2F2P24468 414 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 UGT2B10P36537 528 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CEBPAP49715 358 aaPredicted RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 ITGA8P53708 1063 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 RAB2AP61019 212 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 RPS7P62081 194 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 POLR2GP62487 172 aaKnown RBP eCLIP2.93□□□□□ -1.94
CHD9-203ENST00000447540 RBP5P82980 135 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 DLGAP5Q15398 846 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 MAPK11Q15759 364 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 FAM26DQ5JW98 314 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ANGEL2Q5VTE6 544 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 FAM171BQ6P995 826 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 KDELC1Q6UW63 502 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 PET117Q6UWS5 81 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 KDELC2Q7Z4H8 507 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 SIAH1Q8IUQ4 282 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 PHC2Q8IXK0 858 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ATG16L2Q8NAA4 619 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 TRPV3Q8NET8 790 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CYGBQ8WWM9 190 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CPNE4Q96A23 557 aaPredicted RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 KIAA1143Q96AT1 154 aaPredicted RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 RNF25Q96BH1 459 aaPredicted RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 NXNL1Q96CM4 212 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 RRNAD1Q96FB5 475 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 MTMR12Q9C0I1 747 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ADAM7Q9H2U9 754 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 RPF2Q9H7B2 306 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 SH3BP4Q9P0V3 963 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CRYL1Q9Y2S2 319 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ADAP00813 363 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CD48P09326 243 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 GMPSP49915 693 aaPredicted RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 SESN2P58004 480 aaPredicted RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 NEDD8Q15843 81 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 DCAF6Q58WW2 860 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 RETSATQ6NUM9 610 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 OTOP3Q7RTS5 596 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 IFNL3Q8IZI9 196 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 OR2T34Q8NGX1 318 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 OR2T3Q8NH03 318 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ASB15Q8WXK1 588 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 METTL8Q9H825 291 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 NCOA5Q9HCD5 579 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 CTPS2Q9NRF8 586 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ARL8BQ9NVJ2 186 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 HPF1Q9NWY4 346 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 AP4E1Q9UPM8 1137 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 PCDHGB6Q9Y5F9 930 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 SNX13Q9Y5W8 968 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 LYVE1Q9Y5Y7 322 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CICQ96RK0 1608 aaPredicted RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 CCDC88AQ3V6T2 1871 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CCDC163A0A0D9SF12 145 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 STMND1H3BQB6 276 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 PPM1DO15297 605 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 AIREO43918 545 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 FAM13AO94988 1023 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 DLDP09622 509 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 CKMT1AP12532 417 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 BMP6P22004 513 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 WEE1P30291 646 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 SPRP35270 261 aaPredicted RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 LIG4P49917 911 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ADCY7P51828 1080 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 MGAT5Q09328 741 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ZC3H12BQ5HYM0 836 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 SLFN13Q68D06 897 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 AMIGO1Q86WK6 493 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CCDC24Q8N4L8 307 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 SRFBP1Q8NEF9 429 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 ATG4AQ8WYN0 398 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 NKD2Q969F2 451 aaPredicted RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 TMEM80Q96HE8 168 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 AHCYL2Q96HN2 611 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 EYA3Q99504 573 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 RBM4BQ9BQ04 359 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 RBM4Q9BWF3 364 aaKnown RBP2.93□□□□□ -1.94
CHD9-203ENST00000447540 SMURF2Q9HAU4 748 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 SDHAF3Q9NRP4 125 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 SETD4Q9NVD3 440 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 TBC1D13Q9NVG8 400 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 UCKL1Q9NWZ5 548 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 ZSWIM5Q9P217 1185 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 AASSQ9UDR5 926 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 KCNH4Q9UQ05 1017 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 GSTK1Q9Y2Q3 226 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 PCDHGB2Q9Y5G2 931 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 PCDHA3Q9Y5H8 950 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 EMSYQ7Z589 1322 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CHD4Q14839 1912 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 CYP3A7-CYP3A51PA0A087WV96 503 aa2.93□□□□□ -1.94
CHD9-203ENST00000447540 A0A0B4J203 849 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms