RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ARMC12Q5T9G4 340 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 DENND6BQ8NEG7 585 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 ASB12Q8WXK4 309 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 CENPTQ96BT3 561 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 CALR3Q96L12 384 aaKnown RBP14.91□□□□□ -0.02
HDAC4-204ENST00000446876 LENG8Q96PV6 779 aaPredicted RBP14.91□□□□□ -0.02
HDAC4-204ENST00000446876 PCDHGB2Q9Y5G2 931 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 HS3ST3A1Q9Y663 406 aa14.91□□□□□ -0.02
HDAC4-204ENST00000446876 CCDC66A2RUB6 948 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 FLRT2O43155 660 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 ARHGAP6O43182 974 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 LZTS3O60299 673 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-204ENST00000446876 MAGEC1O60732 1142 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 CBFA2T3O75081 653 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 MMP2P08253 660 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 ALPIP09923 528 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 ELFN1P0C7U0 828 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 GM2AP17900 193 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 CD86P42081 329 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 PEX5P50542 639 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 POLR2LP62875 67 aaKnown RBP14.9□□□□□ -0.02
HDAC4-204ENST00000446876 CCZ1BP86790 482 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 CCZ1P86791 482 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-204ENST00000446876 ZNF211Q13398 564 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-204ENST00000446876 PRKD1Q15139 912 aaPredicted RBP14.9□□□□□ -0.02
HDAC4-204ENST00000446876 CNGA3Q16281 694 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 WSCD2Q2TBF2 565 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 DENND2CQ68D51 928 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 LIPIQ6XZB0 460 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 BBS12Q6ZW61 710 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 PEX26Q7Z412 305 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 ZC3H18Q86VM9 953 aaKnown RBP14.9□□□□□ -0.02
HDAC4-204ENST00000446876 LRRC8AQ8IWT6 810 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 TXLNBQ8N3L3 684 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 PIH1D2Q8WWB5 315 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 AGAP3Q96P47 875 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 FAM118BQ9BPY3 351 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 ERVMER34-1Q9H9K5 563 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 GPR27Q9NS67 375 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 AMACRQ9UHK6 382 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 AMFRQ9UKV5 643 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 PCOLCE2Q9UKZ9 415 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 GUCA1BQ9UMX6 200 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 CHKBQ9Y259 395 aa14.9□□□□□ -0.02
HDAC4-204ENST00000446876 GOLGA6L3A6NEY3 463 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 NPIPB15A6NHN6 443 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-204ENST00000446876 PCDHGA12O60330 932 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 FZD6O60353 706 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 DFNA5O60443 496 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 PCCBP05166 539 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 ITGAVP06756 1048 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 PYGMP11217 842 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 LHCGRP22888 699 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 VIPR1P32241 457 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 NR2C2P49116 596 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 ARRB1P49407 418 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-204ENST00000446876 RWDD2BP57060 319 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 PFN3P60673 137 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 SIM1P81133 766 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-204ENST00000446876 SKOR1P84550 965 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 PDE1CQ14123 709 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-204ENST00000446876 FZD2Q14332 565 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 LRRC14Q15048 493 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 DBX2Q6ZNG2 339 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 TSPAN33Q86UF1 283 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 CCDC112Q8NEF3 446 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 BAHD1Q8TBE0 780 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-204ENST00000446876 RHBDD1Q8TEB9 315 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 SAP25Q8TEE9 199 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 TFB1MQ8WVM0 346 aaKnown RBP14.89□□□□□ -0.03
HDAC4-204ENST00000446876 SPOCK2Q92563 424 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 P3H4Q92791 437 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 C1QTNF7Q9BXJ2 289 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 TDRD1Q9BXT4 1180 aaKnown RBP14.89□□□□□ -0.03
HDAC4-204ENST00000446876 C10orf88Q9H8K7 445 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 PHTF1Q9UMS5 762 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 LRP4O75096 1905 aa14.89□□□□□ -0.03
HDAC4-204ENST00000446876 A0A1W2PQ67 120 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 F5H423 210 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-204ENST00000446876 DDX3YO15523 660 aaKnown RBP14.88□□□□□ -0.03
HDAC4-204ENST00000446876 RECQL5O94762 991 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-204ENST00000446876 HEXIM1O94992 359 aaKnown RBP14.88□□□□□ -0.03
HDAC4-204ENST00000446876 PRLP01236 227 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 ADRB1P08588 477 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 PTPN3P26045 913 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 RABIFP47224 123 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 RXRGP48443 463 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 COPS2P61201 443 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 WASHC5Q12768 1159 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 SUZ12Q15022 739 aaKnown RBP14.88□□□□□ -0.03
HDAC4-204ENST00000446876 ACOX1Q15067 660 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 TRIP6Q15654 476 aaKnown RBP14.88□□□□□ -0.03
HDAC4-204ENST00000446876 CCDC181Q5TID7 509 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 NYAP1Q6ZVC0 841 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 KANSL1Q7Z3B3 1105 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 SYCE1Q8N0S2 351 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 PELI3Q8N2H9 469 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 OXR1Q8N573 874 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 PLA2G15Q8NCC3 412 aa14.88□□□□□ -0.03
HDAC4-204ENST00000446876 LPCAT1Q8NF37 534 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms