RNA–Protein interactions for RNA: ENST00000442721.1

TNXB-202, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-202ENST00000442721 SFTPA2Q8IWL1 248 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 PYROXD2Q8N2H3 581 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 Q8N9G6 341 aaPredicted RBP11.98□□□□□ -0.49
TNXB-202ENST00000442721 MLKLQ8NB16 471 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 FAM172AQ8WUF8 416 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 SLC20A1Q8WUM9 679 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 OR1E3Q8WZA6 343 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 ARHGAP9Q9BRR9 750 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 SUV39H2Q9H5I1 410 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 PDFQ9HBH1 243 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 SEPT10Q9P0V9 454 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 DAAM1Q9Y4D1 1078 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 RNF215Q9Y6U7 377 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 DOPEY2Q9Y3R5 2298 aa11.98□□□□□ -0.49
TNXB-202ENST00000442721 SDK2Q58EX2 2172 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 CFAP69A5D8W1 941 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 TMEM202A6NGA9 273 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 RASA4BC9J798 803 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 RASA4O43374 803 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 NUDT21O43809 227 aaKnown RBP11.97□□□□□ -0.49
TNXB-202ENST00000442721 BUB1BO60566 1050 aaPredicted RBP11.97□□□□□ -0.49
TNXB-202ENST00000442721 HOXC4P09017 264 aaPredicted RBP11.97□□□□□ -0.49
TNXB-202ENST00000442721 CD82P27701 267 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 EPHB2P29323 1055 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 CDR2Q01850 454 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 GRM3Q14832 879 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 CAMK4Q16566 473 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 TPD52L1Q16890 204 aaPredicted RBP11.97□□□□□ -0.49
TNXB-202ENST00000442721 PARP15Q460N3 678 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 C14orf28Q4W4Y0 310 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 ERAP2Q6P179 960 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 BRAT1Q6PJG6 821 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 PHLDB2Q86SQ0 1253 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 ZFAND4Q86XD8 727 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 ZNF354CQ86Y25 554 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 UMODL1-AS1Q8N2C9 162 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 PLA2G15Q8NCC3 412 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 SLC30A5Q8TAD4 765 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 HTR3CQ8WXA8 447 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 USP7Q93009 1102 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 FUBP1Q96AE4 644 aaKnown RBP11.97□□□□□ -0.49
TNXB-202ENST00000442721 EXOC2Q96KP1 924 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 ZNF641Q96N77 438 aaPredicted RBP11.97□□□□□ -0.49
TNXB-202ENST00000442721 CMKLR1Q99788 373 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 NCAPGQ9BPX3 1015 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 C11orf70Q9BRQ4 267 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 FUCA2Q9BTY2 467 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 GANQ9H2C0 597 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 FGF22Q9HCT0 170 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 WDR70Q9NW82 654 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 ATP8A1Q9Y2Q0 1164 aa11.97□□□□□ -0.49
TNXB-202ENST00000442721 TNFRSF10CO14798 259 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 PRKCGP05129 697 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 KRT3P12035 628 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 UNGP13051 313 aaPredicted RBP11.96□□□□□ -0.49
TNXB-202ENST00000442721 RFC1P35251 1148 aaPredicted RBP11.96□□□□□ -0.49
TNXB-202ENST00000442721 TRIM23P36406 574 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 B4GALNT1Q00973 533 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 RALGDSQ12967 914 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 CLCA4Q14CN2 919 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 SPECC1LQ69YQ0 1117 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 TAF8Q7Z7C8 310 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 SLFN11Q7Z7L1 901 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 C17orf82Q86X59 251 aaPredicted RBP11.96□□□□□ -0.49
TNXB-202ENST00000442721 FAM46DQ8NEK8 389 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 OR56A4Q8NGH8 313 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 TUBGCP5Q96RT8 1024 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 TMEM168Q9H0V1 697 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 SEMA6CQ9H3T2 930 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 MRPL40Q9NQ50 206 aaKnown RBP11.96□□□□□ -0.49
TNXB-202ENST00000442721 GEMIN8Q9NWZ8 242 aaKnown RBP11.96□□□□□ -0.49
TNXB-202ENST00000442721 LRIT1Q9P2V4 623 aa11.96□□□□□ -0.49
TNXB-202ENST00000442721 UBA2Q9UBT2 640 aaPredicted RBP11.96□□□□□ -0.49
TNXB-202ENST00000442721 B4DGG1 531 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 CACNB4O00305 520 aaPredicted RBP11.95□□□□□ -0.5
TNXB-202ENST00000442721 PRAMEF11O60813 436 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 PPFIA2O75334 1257 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 RECQL5O94762 991 aaPredicted RBP11.95□□□□□ -0.5
TNXB-202ENST00000442721 GFPT2O94808 682 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 GM2AP17900 193 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 GPD1P21695 349 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 CSNK1DP48730 415 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 MAPK10P53779 464 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 JAM2P57087 298 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 CYP4F2P78329 520 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 NR1D2Q14995 579 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 C16orf72Q14CZ0 275 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 HSP90AA4PQ58FG1 418 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 EFHC2Q5JST6 749 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 COLEC12Q5KU26 742 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 WDR59Q6PJI9 974 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 TRIM72Q6ZMU5 477 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 ZNF438Q7Z4V0 828 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 CAMK1DQ8IU85 385 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 ZSCAN1Q8NBB4 408 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 CCL4L1Q8NHW4 92 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 ECHDC3Q96DC8 303 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 PCDHB18PQ96TA0 734 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 SLC12A9Q9BXP2 914 aa11.95□□□□□ -0.5
TNXB-202ENST00000442721 SLC25A18Q9H1K4 315 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms