RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 CSHL1Q14406 222 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 PLA2G4EQ3MJ16 856 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SAMD4BQ5PRF9 694 aaKnown RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 CATSPEREQ5SY80 951 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 ARHGEF16Q5VV41 709 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 SCIMPQ6UWF3 145 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 ITIH5Q86UX2 942 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 FSTL5Q8N475 847 aaPredicted RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 NDRG1Q92597 394 aaKnown RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 RMDN3Q96TC7 470 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 C9orf16Q9BUW7 83 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 REXO4Q9GZR2 422 aaKnown RBP7.57□□□□□ -1.2
HDAC9-214ENST00000441542 ZNF304Q9HCX3 659 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 TNFRSF12AQ9NP84 129 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 TBC1D13Q9NVG8 400 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 MTMR10Q9NXD2 777 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 MKL2Q9ULH7 1088 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 PLIN4Q96Q06 1357 aa7.57□□□□□ -1.2
HDAC9-214ENST00000441542 DLX3O60479 287 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 KPNA6O60684 536 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 GOT1P17174 413 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 DDX5P17844 614 aaKnown RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CCNCP24863 283 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 PSMA3P25788 255 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 HTR1BP28222 390 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 SDC4P31431 198 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 BMPR1AP36894 532 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 MAP2K4P45985 399 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CXCR3P49682 368 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 C1QTNF8P60827 252 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 LIPMQ5VYY2 423 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 C4orf22Q6V702 233 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CATSPER4Q7RTX7 472 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ZNF420Q8TAQ5 688 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ACMSDQ8TDX5 336 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 HDAC11Q96DB2 347 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 TMEM74Q96NL1 305 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CAMKK2Q96RR4 588 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CDK5RAP1Q96SZ6 601 aaKnown RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 TTYH2Q9BSA4 534 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 SMURF2Q9HAU4 748 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 SUCOQ9UBS9 1254 aaKnown RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 FAM198AQ9UFP1 575 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 NARFQ9UHQ1 456 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 U3KQV3 271 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ZNF831Q5JPB2 1677 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ILVBLA1L0T0 632 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 H3BMM5 538 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 TNFRSF10AO00220 468 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 NME4O00746 187 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 LSM8O95777 96 aaKnown RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ASS1P00966 412 aaKnown RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 C8BP07358 591 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CYP4B1P13584 511 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 IL1R1P14778 569 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 PGAM1P18669 254 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CNTFP26441 200 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 DAB2P98082 770 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 MPP1Q00013 466 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 VAC14Q08AM6 782 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 NIPAL4Q0D2K0 466 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 EPS8Q12929 822 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ARHGEF6Q15052 776 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 WDR45BQ5MNZ6 344 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CCNYL2Q5T2Q4 361 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 C10orf62Q5T681 223 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 TIFABQ6ZNK6 161 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 PLEKHG7Q6ZR37 379 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 FRA10AC1Q70Z53 315 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ZNF354CQ86Y25 554 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CDAN1Q8IWY9 1227 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CHPFQ8IZ52 775 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 SLC38A6Q8IZM9 456 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CNTD1Q8N815 330 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 DTX3Q8N9I9 347 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ZNF280CQ8ND82 737 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 HTR3CQ8WXA8 447 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 SLC7A3Q8WY07 619 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 RPL3LQ92901 407 aaKnown RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 VPS33AQ96AX1 596 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 FAM149B1Q96BN6 582 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 SLC39A13Q96H72 371 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CNPY3Q9BT09 278 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 AASDHPPTQ9NRN7 309 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 OXSMQ9NWU1 459 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 GGA3Q9NZ52 723 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ANKMY1Q9P2S6 941 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 INVSQ9Y283 1065 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 LAMB2P55268 1798 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 TBKBP1A7MCY6 615 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 GNGT2O14610 69 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 TFECO14948 347 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 ANGPT2O15123 496 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 CLASP2O75122 1294 aaKnown RBP7.56□□□□□ -1.2
HDAC9-214ENST00000441542 FYNP06241 537 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 PRKACGP22612 351 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 TTKP33981 857 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 GALNT2Q10471 571 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 LAPTM4AQ15012 233 aa7.56□□□□□ -1.2
HDAC9-214ENST00000441542 AMHR2Q16671 573 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms