RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 DGKBQ9Y6T7 804 aa20.39■□□□□ 0.85
SHOX2-203ENST00000441443 ZNF638Q14966 1978 aaKnown RBP20.39■□□□□ 0.85
SHOX2-203ENST00000441443 TRIM64BA6NI03 449 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 NPHS1O60500 1241 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 SLC25A27O95847 323 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 PSMA4P25789 261 aaKnown RBP20.38■□□□□ 0.85
SHOX2-203ENST00000441443 SULT1E1P49888 294 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 MBTD1Q05BQ5 628 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 CYBRD1Q53TN4 286 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 DDIASQ8IXT1 998 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 AFG1LQ8WV93 481 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 HEXDCQ8WVB3 486 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 GLT1D1Q96MS3 346 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 C1orf50Q9BV19 199 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 MRPL46Q9H2W6 279 aaKnown RBP20.38■□□□□ 0.85
SHOX2-203ENST00000441443 DPP3Q9NY33 737 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 SLC27A5Q9Y2P5 690 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 BRCA1P38398 1863 aaKnown RBP20.38■□□□□ 0.85
SHOX2-203ENST00000441443 CNOT3O75175 753 aaKnown RBP20.38■□□□□ 0.85
SHOX2-203ENST00000441443 CCT8P50990 548 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 PIWIL4Q7Z3Z4 852 aaKnown RBP20.38■□□□□ 0.85
SHOX2-203ENST00000441443 FUNDC1Q8IVP5 155 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 STON2Q8WXE9 905 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 CENPNQ96H22 339 aaPredicted RBP20.38■□□□□ 0.85
SHOX2-203ENST00000441443 PALMDQ9NP74 551 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 CHST12Q9NRB3 414 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 TBC1D13Q9NVG8 400 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 TNFSF13BQ9Y275 285 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 SLC30A1Q9Y6M5 507 aa20.38■□□□□ 0.85
SHOX2-203ENST00000441443 NR5A2O00482 541 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 HBP1O60381 514 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 MTHFD1P11586 935 aaKnown RBP20.37■□□□□ 0.85
SHOX2-203ENST00000441443 CHRM3P20309 590 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 CD68P34810 354 aaPredicted RBP20.37■□□□□ 0.85
SHOX2-203ENST00000441443 IDUAP35475 653 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 CAPGP40121 348 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 RAB10P61026 200 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 INPP5AQ14642 412 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 C8orf82Q6P1X6 216 aaPredicted RBP20.37■□□□□ 0.85
SHOX2-203ENST00000441443 ARMCX2Q7L311 632 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 IFNEQ86WN2 208 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 OR13F1Q8NGS4 319 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 PHF21BQ96EK2 531 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 CSF3RQ99062 836 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 SPON1Q9HCB6 807 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.37■□□□□ 0.85
SHOX2-203ENST00000441443 PKD2L2Q9NZM6 624 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 CLPXO76031 633 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 STMN1P16949 149 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 SLC2A7Q6PXP3 512 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 PLPPR4Q7Z2D5 763 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 CUZD1Q86UP6 607 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 DEFB106AQ8N104 65 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 NAT16Q8N8M0 369 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 SNX19Q92543 992 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 SEZ6LQ9BYH1 1024 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 MEAF6Q9HAF1 191 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 LRRC4Q9HBW1 653 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 SETD4Q9NVD3 440 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 GIN1Q9NXP7 522 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 ERAP1Q9NZ08 941 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 ITGB1BP2Q9UKP3 347 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 V9GYQ6 96 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 FAM95CA0A1B0GW59 222 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 PPEF2O14830 753 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 RASAL1O95294 804 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 ZIK1Q3SY52 487 aaPredicted RBP20.37■□□□□ 0.85
SHOX2-203ENST00000441443 ATAD3AQ9NVI7 634 aa20.37■□□□□ 0.85
SHOX2-203ENST00000441443 SMPD3Q9NY59 655 aaPredicted RBP20.37■□□□□ 0.85
SHOX2-203ENST00000441443 MTF2Q9Y483 593 aaPredicted RBP20.37■□□□□ 0.85
SHOX2-203ENST00000441443 NFKB1P19838 968 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 NFKBIAP25963 317 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 OPRL1P41146 370 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 ADCYAP1R1P41586 468 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 RPS3AP61247 264 aaKnown RBP20.36■□□□□ 0.85
SHOX2-203ENST00000441443 RBP5P82980 135 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 CSHL1Q14406 222 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 VPS26BQ4G0F5 336 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 OR6B3Q8NGW1 331 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 SGCDQ92629 289 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 ELMO2Q96JJ3 720 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 SLC45A3Q96JT2 553 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 CXCL16Q9H2A7 254 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 GIMAP2Q9UG22 337 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 SCN4AP35499 1836 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 IGKV6-21A0A0C4DH24 114 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 INPP4BO15327 924 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 AQP9O43315 295 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 KDM1AO60341 852 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 CYP2B6P20813 491 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 HADHAP40939 763 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 TAS2R39P59534 338 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 KIF19Q2TAC6 998 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 ZNF618Q5T7W0 954 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 IFNLR1Q8IU57 520 aaPredicted RBP20.36■□□□□ 0.85
SHOX2-203ENST00000441443 SCAIQ8N9R8 606 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 ZC3H15Q8WU90 426 aaKnown RBP20.36■□□□□ 0.85
SHOX2-203ENST00000441443 FAM49AQ9H0Q0 323 aaPredicted RBP20.36■□□□□ 0.85
SHOX2-203ENST00000441443 SNX25Q9H3E2 840 aa20.36■□□□□ 0.85
SHOX2-203ENST00000441443 TMEM9Q9P0T7 183 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms