RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 LIPIQ6XZB0 460 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 RCOR2Q8IZ40 523 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.76■■□□□ 1.39
VARS-217ENST00000440048 DESI2Q9BSY9 194 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 CAAP1Q9H8G2 361 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 HAUS2Q9NVX0 235 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 B4GALT6Q9UBX8 382 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 PHTF1Q9UMS5 762 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.76■■□□□ 1.39
VARS-217ENST00000440048 RAI2Q9Y5P3 530 aa23.76■■□□□ 1.39
VARS-217ENST00000440048 SPTY2D1-AS1A0A0U1RR47 76 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 A8MX80 341 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 CST8O60676 142 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 SDC3O75056 442 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 CES1P23141 567 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 IFI35P80217 286 aaPredicted RBP23.75■■□□□ 1.39
VARS-217ENST00000440048 NIPAL4Q0D2K0 466 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 AP1B1Q10567 949 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 PDE1CQ14123 709 aaPredicted RBP23.75■■□□□ 1.39
VARS-217ENST00000440048 LRRC14Q15048 493 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 AGERQ15109 404 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 TFDP3Q5H9I0 405 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 ARMC12Q5T9G4 340 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 KAZNQ674X7 775 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 EXD1Q8NHP7 514 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 ARRDC2Q8TBH0 407 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 IFT43Q96FT9 208 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 IL12RB2Q99665 862 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 SPEGQ15772 3267 aa23.75■■□□□ 1.39
VARS-217ENST00000440048 COL5A1P20908 1838 aaPredicted RBP23.75■■□□□ 1.39
VARS-217ENST00000440048 hCG_1818297A0A087WSY0 165 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 PPP1R12AO14974 1030 aaPredicted RBP23.74■■□□□ 1.39
VARS-217ENST00000440048 TRIM16O95361 564 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 ELFN1P0C7U0 828 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 FTH1P19P0C7X4 201 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 ADCY2Q08462 1091 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 ZBTB17Q13105 803 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 ZNF542PQ5EBM4 170 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 CCDC50Q8IVM0 306 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 EID2Q8N6I1 236 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 KIAA1524Q8TCG1 905 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 RBM41Q96IZ5 413 aaKnown RBP23.74■■□□□ 1.39
VARS-217ENST00000440048 DNAJC28Q9NX36 388 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 SAE1Q9UBE0 346 aaPredicted RBP23.74■■□□□ 1.39
VARS-217ENST00000440048 PCDHA3Q9Y5H8 950 aa23.74■■□□□ 1.39
VARS-217ENST00000440048 A0A0U1RQJ8 604 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 FZD6O60353 706 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 TOP3BO95985 862 aaKnown RBP23.73■■□□□ 1.39
VARS-217ENST00000440048 PDHA1P08559 390 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 GM2AP17900 193 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 VIPR1P32241 457 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 CTNNA1P35221 906 aaKnown RBP23.73■■□□□ 1.39
VARS-217ENST00000440048 NR2C2P49116 596 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 GSDMDP57764 484 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 YPEL5P62699 121 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 FAM182AQ5T1J6 154 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 B4GALNT4Q76KP1 1039 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 SLCO6A1Q86UG4 719 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 CNTD1Q8N815 330 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 LRRC57Q8N9N7 239 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 PIH1D2Q8WWB5 315 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 BRD8Q9H0E9 1235 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 TRIM10Q9UDY6 481 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 FTSJ1Q9UET6 329 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 WASF3Q9UPY6 502 aa23.73■■□□□ 1.39
VARS-217ENST00000440048 KMT2BQ9UMN6 2715 aaPredicted RBP23.73■■□□□ 1.39
VARS-217ENST00000440048 GRID2IPA4D2P6 1211 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 TOR1BO14657 336 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 TNFSF14O43557 240 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 RECQL5O94762 991 aaPredicted RBP23.72■■□□□ 1.39
VARS-217ENST00000440048 ATXN1LP0C7T5 689 aaKnown RBP23.72■■□□□ 1.39
VARS-217ENST00000440048 PECAM1P16284 738 aaPredicted RBP23.72■■□□□ 1.39
VARS-217ENST00000440048 TGM2P21980 687 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 DGKAP23743 735 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 NFKBIAP25963 317 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 THOP1P52888 689 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 KIF5AQ12840 1032 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 PTPRRQ15256 657 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 BZW1Q7L1Q6 419 aaKnown RBP23.72■■□□□ 1.39
VARS-217ENST00000440048 PARGQ86W56 976 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 SLC25A45Q8N413 288 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 PNPLA1Q8N8W4 532 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 SCRN2Q96FV2 425 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 CEP41Q9BYV8 373 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 UCKL1Q9NWZ5 548 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 TOR4AQ9NXH8 423 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 APOBEC2Q9Y235 224 aaKnown RBP23.72■■□□□ 1.39
VARS-217ENST00000440048 PPIL1Q9Y3C6 166 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 USP24Q9UPU5 2620 aa23.72■■□□□ 1.39
VARS-217ENST00000440048 NPIPB15A6NHN6 443 aaPredicted RBP23.71■■□□□ 1.39
VARS-217ENST00000440048 PIAS2O75928 621 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 CSF2P04141 144 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 MMP2P08253 660 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 CYP2A6P11509 494 aaPredicted RBP23.71■■□□□ 1.39
VARS-217ENST00000440048 CTPS1P17812 591 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 CTNNA2P26232 953 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 EIF2B5Q13144 721 aaKnown RBP23.71■■□□□ 1.39
VARS-217ENST00000440048 PTK2BQ14289 1009 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 INPP5AQ14642 412 aa23.71■■□□□ 1.39
VARS-217ENST00000440048 CNGA3Q16281 694 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms