RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 ABCG1P45844 678 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 ADKP55263 362 aaKnown RBP16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 C1orf61Q13536 156 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 ELOCQ15369 112 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 TXNRD3NBQ6F5E7 133 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 ALKBH5Q6P6C2 394 aaKnown RBP16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 LVRNQ6Q4G3 990 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 LIPIQ6XZB0 460 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 EFL1Q7Z2Z2 1120 aaKnown RBP16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 SLC35F3Q8IY50 421 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 ATPAF2Q8N5M1 289 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 TPCN2Q8NHX9 752 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 NSMCE3Q96MG7 304 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 MGME1Q9BQP7 344 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 NENFQ9UMX5 172 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 OR1A2Q9Y585 309 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 PCDHB1Q9Y5F3 818 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 MYLKQ15746 1914 aa16.36■□□□□ 0.21
SNRPD3-204ENST00000439775 CPED1A4D0V7 1026 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 YY2O15391 372 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 CSO75390 466 aaKnown RBP16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 RECQL5O94762 991 aaPredicted RBP16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 RASGRP1O95267 797 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 HNRNPH3P31942 346 aaKnown RBP16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 ACTN2P35609 894 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 CDH6P55285 790 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 KIAA1024LP59773 190 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 TBC1D25Q3MII6 688 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 RALGPS1Q5JS13 557 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 LRRC49Q8IUZ0 686 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 BBS5Q8N3I7 341 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 PAF1Q8N7H5 531 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 FAM71BQ8TC56 605 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 CPLX3Q8WVH0 158 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 GRAMD1AQ96CP6 724 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 BTBD6Q96KE9 485 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 WDR92Q96MX6 357 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 DCBLD2Q96PD2 775 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 NUDCD1Q96RS6 583 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 IFNKQ9P0W0 207 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 KLQ9UEF7 1012 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 DGKBQ9Y6T7 804 aa16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 URB1O60287 2271 aaKnown RBP16.35■□□□□ 0.21
SNRPD3-204ENST00000439775 MYO1FO00160 1098 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 RRP8O43159 456 aaKnown RBP16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 TCEA3O75764 348 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 DXOO77932 396 aaKnown RBP16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 TPM3P06753 285 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 CELA2BP08218 269 aaPredicted RBP16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 HOXC4P09017 264 aaPredicted RBP16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 GM2AP17900 193 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 TGM2P21980 687 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 SRP54P61011 504 aaKnown RBP16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 HADHQ16836 314 aaKnown RBP16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 ISXQ2M1V0 245 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 ZSCAN23Q3MJ62 389 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 CCDC122Q5T0U0 273 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 ESRP1Q6NXG1 681 aaKnown RBP16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 ENPP7Q6UWV6 458 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 HID1Q8IV36 788 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 PGBD5Q8N414 524 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 ARL10Q8N8L6 244 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 PLA2G15Q8NCC3 412 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 WDR48Q8TAF3 677 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 ZNF564Q8TBZ8 553 aaPredicted RBP16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 NSMCE1Q8WV22 266 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 SCG3Q8WXD2 468 aaKnown RBP16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 FGF11Q92914 225 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 TSACCQ96A04 125 aaPredicted RBP16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 PDXPQ96GD0 296 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 DOLKQ9UPQ8 538 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 LRRK1Q38SD2 2015 aa16.34■□□□□ 0.21
SNRPD3-204ENST00000439775 LRP4O75096 1905 aa16.33■□□□□ 0.21
SNRPD3-204ENST00000439775 USP12O75317 370 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 CTSEP14091 401 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 KELP23276 732 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 IL4RP24394 825 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 NFKBIAP25963 317 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 CASP14P31944 242 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 TRIM23P36406 574 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 KRT81Q14533 505 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 PERM1Q5SV97 790 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 IGF2-ASQ6U949 168 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 LRRC69Q6ZNQ3 347 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 GKN2Q86XP6 184 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 LSMEM2Q8N112 164 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 PCDH19Q8TAB3 1148 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 FUBP1Q96AE4 644 aaKnown RBP16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 RBM15Q96T37 977 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 NOD2Q9HC29 1040 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 KCTD5Q9NXV2 234 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 B4GALT6Q9UBX8 382 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 LCMT1Q9UIC8 334 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 PADI4Q9UM07 663 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 PCDHGC4Q9Y5F7 938 aa16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.33■□□□□ 0.22e-6■■■□□ 19.1
SNRPD3-204ENST00000439775 COL27A1Q8IZC6 1860 aaPredicted RBP16.33■□□□□ 0.2
SNRPD3-204ENST00000439775 ANKRD36A6QL64 1941 aa16.32■□□□□ 0.2
SNRPD3-204ENST00000439775 CACNB4O00305 520 aaPredicted RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms