RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 SHOX2O60902 331 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 BANF1O75531 89 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 RFPL2O75678 378 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 USP1O94782 785 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 FGF1P05230 155 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 HLA-DQB2P05538 268 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 RHOP08100 348 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SERPINF2P08697 491 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 ALADP13716 330 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 MYOGP15173 224 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 KRT15P19012 456 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 PAMP19021 973 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CA4P22748 312 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 PRKCHP24723 683 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 ADRA1DP25100 572 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 MGAT1P26572 445 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 HOXD9P28356 352 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 HPDP32754 393 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 BMP8BP34820 402 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 ACVRL1P37023 503 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 MDH1P40925 334 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 HADHAP40939 763 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CD86P42081 329 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 GRIA1P42261 906 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 NRIP1P48552 1158 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SERPINH1P50454 418 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 IRAK1P51617 712 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 PLK1P53350 603 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 WNT3AP56704 352 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SESN2P58004 480 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SULT2A1Q06520 285 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 MGAT5Q09328 741 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CDH18Q13634 790 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SPARCL1Q14515 664 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 DMC1Q14565 340 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CRYMQ14894 314 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TMED2Q15363 201 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TERF2Q15554 542 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TEAD2Q15562 447 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 DUSP6Q16828 381 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 UGP2Q16851 508 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 KBTBD12Q3ZCT8 623 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 PRSS36Q5K4E3 855 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SYCP2LQ5T4T6 812 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 FYB2Q5VWT5 728 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 RNF43Q68DV7 783 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 PDPK2PQ6A1A2 396 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 FAM109BQ6ICB4 259 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CXorf57Q6NSI4 855 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 KDELC1Q6UW63 502 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 RANBP10Q6VN20 620 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TMEM184AQ6ZMB5 413 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 UNC5AQ6ZN44 842 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZNF534Q76KX8 674 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 OTOP3Q7RTS5 596 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TMEM135Q86UB9 458 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CD163Q86VB7 1156 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CIR1Q86X95 450 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 MFN1Q8IWA4 741 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CTAGE3PQ8IX95 158 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 LMNTD2Q8IXW0 634 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 AGGF1Q8N302 714 aaeCLIP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CARNMT1Q8N4J0 409 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CELF5Q8N6W0 485 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TDRD5Q8NAT2 981 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 IPMKQ8NFU5 416 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 OR52K1Q8NGK4 314 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 FIBINQ8TAL6 211 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SH3RF2Q8TEC5 729 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 DCAKDQ8WVC6 231 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC44A1Q8WWI5 657 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SMG7Q92540 1137 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 PEX13Q92968 403 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 E2F7Q96AV8 911 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TADA1Q96BN2 335 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 ZNF707Q96C28 371 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 OXNAD1Q96HP4 312 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 PRICKLE1Q96MT3 831 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 NECAB3Q96P71 396 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 RANBP9Q96S59 729 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SRPK1Q96SB4 655 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SMC6Q96SB8 1091 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 PAFAH2Q99487 392 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SEMA3CQ99985 751 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 GDF15Q99988 308 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 GORASP1Q9BQQ3 440 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 DHRS4Q9BTZ2 278 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 MLPHQ9BV36 600 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 FICDQ9BVA6 458 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 KIFC1Q9BW19 673 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 CINPQ9BW66 212 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 ADGRE3Q9BY15 652 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SLC2A11Q9BYW1 496 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 TRABDQ9H4I3 376 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 PDFQ9HBH1 243 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 ARNT2Q9HBZ2 717 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 MRM3Q9HC36 420 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 SSU72Q9NP77 194 aaKnown RBP4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 NT5MQ9NPB1 228 aa4.01□□□□□ -1.77
HMGB1P37-201ENST00000439613 HCFC1R1Q9NWW0 138 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms