RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ARPC2O15144 300 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 PEX10O60683 326 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 TOMM70O94826 608 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 AP2A1O95782 977 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 MBL2P11226 248 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 NFKB1P19838 968 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 MAGP20916 626 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 PTPN3P26045 913 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 PSMD8P48556 350 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 FRG1Q14331 258 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 BCL2A1Q16548 175 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 PIWIL4Q7Z3Z4 852 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 ZCCHC7Q8N3Z6 543 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 ZFP90Q8TF47 636 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 HTRA1Q92743 480 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 CD320Q9NPF0 282 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 TMEM9Q9P0T7 183 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 KLQ9UEF7 1012 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 NOX1Q9Y5S8 564 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 DOCK5Q9H7D0 1870 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 ACOX3O15254 700 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 MAFO75444 373 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 BDNFP23560 247 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 PAX3P23760 479 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 TAS2R39P59534 338 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 STXBP2Q15833 593 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 TIGD2Q4W5G0 525 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 RABL3Q5HYI8 236 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 SLC26A9Q7LBE3 791 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 R3HCC1LQ7Z5L2 792 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 FUNDC1Q8IVP5 155 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 DEFB106AQ8N104 65 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 RYBPQ8N488 228 aaPredicted RBP11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 SMG8Q8ND04 991 aaKnown RBP11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 TRPV3Q8NET8 790 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 FUNDC2Q9BWH2 189 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 EPS8L2Q9H6S3 715 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 VRTNQ9H8Y1 702 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 CYP3A43Q9HB55 503 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 CDHR5Q9HBB8 845 aa11.6□□□□□ -0.55
HMGCS1-202ENST00000433297 CNTNAP1P78357 1384 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 EEF2KO00418 725 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 BCAS1O75363 584 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 LDLRP01130 860 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 APLP1P51693 650 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 IER5Q5VY09 327 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 ZNF773Q6PK81 442 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 C3orf30Q96M34 536 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 PCYT2Q99447 389 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 NIFKQ9BYG3 293 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 ATXN3LQ9H3M9 355 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 EML4Q9HC35 981 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.59□□□□□ -0.556e-14■■■■■ 27.6
HMGCS1-202ENST00000433297 MTRRQ9UBK8 725 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 ACKR2O00590 384 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 JCHAINP01591 159 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 ATP5F1P24539 256 aaPredicted RBP11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 TKTP29401 623 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 CHRNA5P30532 468 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 BCAT1P54687 386 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 ADAM17P78536 824 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 TSPY1Q01534 308 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 IFITM3Q01628 133 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 GHRHRQ02643 423 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 FPGSQ05932 587 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 AQP6Q13520 282 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 MAPRE1Q15691 268 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 INAQ16352 499 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 INAVAQ3KP66 663 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 HABP4Q5JVS0 413 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 FAM45BPQ6NSW5 357 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 ITIH5Q86UX2 942 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 STK32CQ86UX6 486 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 ADGRG5Q8IZF4 528 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 CLIP4Q8N3C7 705 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 FAM45AQ8TCE6 357 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 HDAC11Q96DB2 347 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 MROQ9BYG7 248 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 DPEP3Q9H4B8 488 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 MAP10Q9P2G4 905 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 BAG5Q9UL15 447 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 USP22Q9UPT9 525 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 EP400Q96L91 3159 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 IQCA1LA6NCM1 817 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 AURKAO14965 403 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 MMP10P09238 476 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 SHMT2P34897 504 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 KCNC4Q03721 635 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 TMEM132DQ14C87 1099 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 SLC22A16Q86VW1 577 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 KIAA2013Q8IYS2 634 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 SLC7A14Q8TBB6 771 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 SLC35F5Q8WV83 523 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 DUS3LQ96G46 650 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 TDRD1Q9BXT4 1180 aaKnown RBP11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 CMTM6Q9NX76 183 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 DPP3Q9NY33 737 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 NDUFAF1Q9Y375 327 aa11.59□□□□□ -0.55
HMGCS1-202ENST00000433297 AQP12BA6NM10 295 aa11.58□□□□□ -0.56
HMGCS1-202ENST00000433297 TARM1B6A8C7 271 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms