RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 NRBF2Q96F24 287 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 FAR2Q96K12 515 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 MYRFLQ96LU7 910 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 TBCBQ99426 244 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 DNAI2Q9GZS0 605 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 EPS8L2Q9H6S3 715 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 SPON1Q9HCB6 807 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 TLR9Q9NR96 1032 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 IFT52Q9Y366 437 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 MAGED1Q9Y5V3 778 aaPredicted RBP11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 MGAMO43451 1857 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 SCN4AP35499 1836 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 ARPC2O15144 300 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 PGK1P00558 417 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 NFICP08651 508 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 JUNBP17275 347 aaPredicted RBP11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 PTPN2P17706 415 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 NMBRP28336 390 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 NR2C2P49116 596 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 DPYSL2Q16555 572 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 VPS26BQ4G0F5 336 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 TMEM236Q5W0B7 351 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 CLEC6AQ6EIG7 209 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 GADL1Q6ZQY3 521 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 CYP2U1Q7Z449 544 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 TMEM135Q86UB9 458 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 EXOC8Q8IYI6 725 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 SPARTQ8N0X7 666 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 ZCCHC7Q8N3Z6 543 aaKnown RBP11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 C1orf127Q8N9H9 656 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 SEPHS2Q99611 448 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 ALOXE3Q9BYJ1 711 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 WDR12Q9GZL7 423 aaKnown RBP11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 EIF2B3Q9NR50 452 aaKnown RBP11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 CMTM6Q9NX76 183 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 MAP10Q9P2G4 905 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 VWA7Q9Y334 891 aa11.14□□□□□ -0.63
SEMA4D-209ENST00000429836 MSCO60682 206 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 PLA2G6O60733 806 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 ALBP02768 609 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 KCNA5P22460 613 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 LEPRP48357 1165 aaKnown RBP11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 ARCN1P48444 511 aaKnown RBP11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 NDST1P52848 882 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 GOLGA7BQ2TAP0 167 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 FAM209AQ5JX71 171 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 ZC3HC1Q86WB0 502 aaKnown RBP11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 RNF135Q8IUD6 432 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 MMAAQ8IVH4 418 aaKnown RBP11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 KIAA2013Q8IYS2 634 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 TRPV3Q8NET8 790 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 ZUFSPQ96AP4 578 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 HOXD1Q9GZZ0 328 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 MRPL46Q9H2W6 279 aaKnown RBP11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 PIF1Q9H611 641 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 GDAP2Q9NXN4 497 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 UBP1Q9NZI7 540 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 BFARQ9NZS9 450 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 MTF2Q9Y483 593 aaPredicted RBP11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 ZNF638Q14966 1978 aaKnown RBP11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 AQP12BA6NM10 295 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 ABCB7O75027 752 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 GABBR2O75899 941 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 INMTO95050 263 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 KRT75O95678 551 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 UGT2B4P06133 528 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 GFAPP14136 432 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 BDNFP23560 247 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 RFC2P35250 354 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 APLP1P51693 650 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 POU5F1BQ06416 359 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 NDUFA5Q16718 116 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 UGT3A1Q6NUS8 523 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 AQP12AQ8IXF9 295 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 MFSD4AQ8N468 514 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 SLC22A17Q8WUG5 538 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 GPR22Q99680 433 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 LPIN3Q9BQK8 851 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 PRDM12Q9H4Q4 367 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 KLHL8Q9P2G9 620 aaPredicted RBP11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 USP22Q9UPT9 525 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 RIPK3Q9Y572 518 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 SCN9AQ15858 1988 aa11.13□□□□□ -0.63
SEMA4D-209ENST00000429836 ZNF831Q5JPB2 1677 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 SYNJ2BP-COX16A0A087WUM0 186 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 NOTOA8MTQ0 251 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 DPYSL4O14531 572 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 NPM3O75607 178 aaKnown RBP11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 HTR1AP08908 422 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 VDRP11473 427 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 MAGP20916 626 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 CCND2P30279 289 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 ATP6V0D1P61421 351 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 CTBP1Q13363 440 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 SLC12A1Q13621 1099 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 GEN1Q17RS7 908 aa11.12□□□□□ -0.63
SEMA4D-209ENST00000429836 KIF19Q2TAC6 998 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms