RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 VASPP50552 380 aaPredicted RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 ZNF140P52738 457 aaPredicted RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 GYS2P54840 703 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 EIF3BP55884 814 aaKnown RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 BMPR2Q13873 1038 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 PON2Q15165 354 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 CNGA3Q16281 694 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 ARSIQ5FYB1 569 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 TNFAIP8L3Q5GJ75 292 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 RALGPS1Q5JS13 557 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 ARMC12Q5T9G4 340 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 FSTL4Q6MZW2 842 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 LYSMD3Q7Z3D4 306 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 METTL3Q86U44 580 aaKnown RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 TSPAN33Q86UF1 283 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 KCNMB4Q86W47 210 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 CTAGE3PQ8IX95 158 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 PPM1NQ8N819 430 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMC6-204ENST00000428868 MZB1Q8WU39 189 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 SLC44A1Q8WWI5 657 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 ARRDC3Q96B67 414 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 TLCD1Q96CP7 247 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 ECHDC3Q96DC8 303 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 DNAJC1Q96KC8 554 aaKnown RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 KLHL32Q96NJ5 620 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 AGAP2Q99490 1192 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 P2RY13Q9BPV8 354 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 CPEB1Q9BZB8 566 aaKnown RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 TMEM245Q9H330 911 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 ACBD3Q9H3P7 528 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 SUV39H2Q9H5I1 410 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 ATP13A3Q9H7F0 1226 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 SUDS3Q9H7L9 328 aaPredicted RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 MRM3Q9HC36 420 aaKnown RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 IARS2Q9NSE4 1012 aaKnown RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.92□□□□□ -0.98
SMC6-204ENST00000428868 THAP10Q9P2Z0 257 aaPredicted RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 LGALS13Q9UHV8 139 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 SARDHQ9UL12 918 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 NOVA2Q9UNW9 492 aaKnown RBP8.92□□□□□ -0.98
SMC6-204ENST00000428868 ZNF711Q9Y462 761 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 FAM169AQ9Y6X4 670 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 TTC28Q96AY4 2481 aa8.92□□□□□ -0.98
SMC6-204ENST00000428868 A0A0J9YYE9 177 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 A0A1W2PPM1 405 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 HEATR9A2RTY3 570 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 HMX2A2RU54 273 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 NPIPB15A6NHN6 443 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 GPR39O43194 453 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 OPA1O60313 960 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 SPAG6O75602 509 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 VAPBO95292 243 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 POP4O95707 220 aaKnown RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 TRBC1P01850 177 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 GSTA2P09210 222 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 MYZAPP0CAP1 466 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 ALADP13716 330 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 LHCGRP22888 699 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 SERPINA4P29622 427 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 HOXD11P31277 338 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 CA5AP35218 305 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 TIE1P35590 1138 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 HNF1BP35680 557 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 GMPRP36959 345 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 GRIA2P42262 883 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 PGGT1BP53609 377 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 MPP1Q00013 466 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 MGAT5Q09328 741 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 SEMA3AQ14563 771 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 EIF4HQ15056 248 aaKnown RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 CDKN3Q16667 212 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 KLHL38Q2WGJ6 581 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 HNRNPA1L2Q32P51 320 aaKnown RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 HSP90AA5PQ58FG0 334 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 ZNF789Q5FWF6 425 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 C9orf64Q5T6V5 341 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 TEDDM1Q5T9Z0 273 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 AGBL2Q5U5Z8 902 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 KIAA0930Q6ICG6 404 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 ADGRD1Q6QNK2 874 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 GDPD4Q6W3E5 623 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 RFLNAQ6ZTI6 216 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 MARK2Q7KZI7 788 aaKnown RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 GLT6D1Q7Z4J2 308 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 LDB1Q86U70 411 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 CACUL1Q86Y37 369 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 TDRPQ86YL5 185 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 DENND6AQ8IWF6 608 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 ACVR1CQ8NER5 493 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 OR4K2Q8NGD2 314 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 ATP6V1G3Q96LB4 118 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 TBATAQ96M53 351 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 CYTH2Q99418 400 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 HEPHQ9BQS7 1158 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 NAT9Q9BTE0 207 aa8.91□□□□□ -0.98
SMC6-204ENST00000428868 ROPN1BQ9BZX4 212 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 ROPN1Q9HAT0 212 aaPredicted RBP8.91□□□□□ -0.98
SMC6-204ENST00000428868 BPIFA1Q9NP55 256 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms