RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 RFTN1Q14699 578 aaPredicted RBP17.18■□□□□ 0.34
TRIM39-209ENST00000428728 ELOCQ15369 112 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 KCTD16Q68DU8 428 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 FOXR1Q6PIV2 292 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 PLA2G15Q8NCC3 412 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 TPCN2Q8NHX9 752 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 HSPH1Q92598 858 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 TRIM11Q96F44 468 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 WDR92Q96MX6 357 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 EDEM3Q9BZQ6 932 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 ZWILCHQ9H900 591 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 ASCL3Q9NQ33 180 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 UNC13CQ8NB66 2214 aa17.18■□□□□ 0.34
TRIM39-209ENST00000428728 A0A1W2PNU3 283 aaPredicted RBP17.17■□□□□ 0.34
TRIM39-209ENST00000428728 TTC24A2A3L6 582 aaPredicted RBP17.17■□□□□ 0.34
TRIM39-209ENST00000428728 PMS2P1A4D2B8 440 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 H3BRJ5 948 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 DXOO77932 396 aaKnown RBP17.17■□□□□ 0.34
TRIM39-209ENST00000428728 RECQL5O94762 991 aaPredicted RBP17.17■□□□□ 0.34
TRIM39-209ENST00000428728 MYBL1P10243 752 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 IL1R2P27930 398 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 ARL4AP40617 200 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 CXADRP78310 365 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 SPIDRQ14159 915 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 ZNF235Q14590 738 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 LBRQ14739 615 aaKnown RBP17.17■□□□□ 0.34
TRIM39-209ENST00000428728 TMCO4Q5TGY1 634 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 LIPIQ6XZB0 460 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 PSTKQ8IV42 348 aaKnown RBP17.17■□□□□ 0.34
TRIM39-209ENST00000428728 LSMEM2Q8N112 164 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 ARL10Q8N8L6 244 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 ATL2Q8NHH9 583 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 SCG3Q8WXD2 468 aaKnown RBP17.17■□□□□ 0.34
TRIM39-209ENST00000428728 CCDC74AQ96AQ1 378 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 ECHDC3Q96DC8 303 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 HIC2Q96JB3 615 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 NSMCE3Q96MG7 304 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 MRPL47Q9HD33 250 aaKnown RBP17.17■□□□□ 0.34
TRIM39-209ENST00000428728 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.17■□□□□ 0.34
TRIM39-209ENST00000428728 SEPT3Q9UH03 358 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 GPR34Q9UPC5 381 aa17.17■□□□□ 0.34
TRIM39-209ENST00000428728 FASNP49327 2511 aaKnown RBP17.16■□□□□ 0.34
TRIM39-209ENST00000428728 TCEA3O75764 348 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 PRB1P04280 392 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 AMPD1P23109 780 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 HCAR3P49019 387 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 ZNF135P52742 658 aaPredicted RBP17.16■□□□□ 0.34
TRIM39-209ENST00000428728 PDX1P52945 283 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 ERVPABLB-1P60509 514 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 AP1S1P61966 158 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 SLC10A7Q0GE19 358 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 AGERQ15109 404 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 DPPA4Q7L190 304 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 GKN2Q86XP6 184 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 PDCD6IPQ8WUM4 868 aaKnown RBP17.16■□□□□ 0.34
TRIM39-209ENST00000428728 KCNE4Q8WWG9 221 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 OR1E3Q8WZA6 343 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 PSKH2Q96QS6 385 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 THSD1Q9NS62 852 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 ETNK2Q9NVF9 386 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 RABGEF1Q9UJ41 708 aa17.16■□□□□ 0.34
TRIM39-209ENST00000428728 CACNB4O00305 520 aaPredicted RBP17.15■□□□□ 0.34
TRIM39-209ENST00000428728 TRAFD1O14545 582 aaPredicted RBP17.15■□□□□ 0.34
TRIM39-209ENST00000428728 RBMS1P29558 406 aaKnown RBP17.15■□□□□ 0.34
TRIM39-209ENST00000428728 RENBPP51606 427 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 KIAA1024LP59773 190 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 IQCB1Q15051 598 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 ACOX1Q15067 660 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 DPYSL2Q16555 572 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 BROXQ5VW32 411 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 TMCO3Q6UWJ1 677 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 GPR155Q7Z3F1 870 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 LZTR1Q8N653 840 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 FUBP1Q96AE4 644 aaKnown RBP17.15■□□□□ 0.34
TRIM39-209ENST00000428728 BTBD6Q96KE9 485 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.15■□□□□ 0.34
TRIM39-209ENST00000428728 ISCUQ9H1K1 167 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 FGF22Q9HCT0 170 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 MRPL40Q9NQ50 206 aaKnown RBP17.15■□□□□ 0.34
TRIM39-209ENST00000428728 B4GALT6Q9UBX8 382 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 MOSPD1Q9UJG1 213 aa17.15■□□□□ 0.34
TRIM39-209ENST00000428728 BPTFQ12830 3046 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 TMEM202A6NGA9 273 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 CPP00450 1065 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 TNFP01375 233 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 GM2AP17900 193 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 PCK1P35558 622 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 POLR2LP62875 67 aaKnown RBP17.14■□□□□ 0.33
TRIM39-209ENST00000428728 NSUN2Q08J23 767 aaKnown RBP eCLIP17.14■□□□□ 0.33
TRIM39-209ENST00000428728 NR1I3Q14994 352 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 DENND2CQ68D51 928 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 TXNRD3NBQ6F5E7 133 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 LVRNQ6Q4G3 990 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 POLNQ7Z5Q5 900 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 PELI3Q8N2H9 469 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 SDR16C5Q8N3Y7 309 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 ATPAF2Q8N5M1 289 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 OR56A4Q8NGH8 313 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 WDR48Q8TAF3 677 aa17.14■□□□□ 0.33
TRIM39-209ENST00000428728 ZNF599Q96NL3 588 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms