RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 CCDC74AQ96AQ1 378 aa10.11□□□□□ -0.79
GACAT3-201ENST00000426539 PDXPQ96GD0 296 aa10.11□□□□□ -0.79
GACAT3-201ENST00000426539 TUBGCP5Q96RT8 1024 aa10.11□□□□□ -0.79
GACAT3-201ENST00000426539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.11□□□□□ -0.79
GACAT3-201ENST00000426539 DHX35Q9H5Z1 703 aaKnown RBP10.11□□□□□ -0.79
GACAT3-201ENST00000426539 SIRPGQ9P1W8 387 aa10.11□□□□□ -0.79
GACAT3-201ENST00000426539 GULP1Q9UBP9 304 aa10.11□□□□□ -0.79
GACAT3-201ENST00000426539 PCSK1NQ9UHG2 260 aa10.11□□□□□ -0.79
GACAT3-201ENST00000426539 BPTFQ12830 3046 aa10.11□□□□□ -0.79
GACAT3-201ENST00000426539 TTC24A2A3L6 582 aaPredicted RBP10.1□□□□□ -0.79
GACAT3-201ENST00000426539 TMEM202A6NGA9 273 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 ARHGAP42A6NI28 874 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 LRRC53A6NM62 1247 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 ERVH48-1M5A8F1 160 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 PALMO75781 387 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 RECQL5O94762 991 aaPredicted RBP10.1□□□□□ -0.79
GACAT3-201ENST00000426539 TNFSF15O95150 251 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 ALPIP09923 528 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 CDK11BP21127 795 aaKnown RBP10.1□□□□□ -0.79
GACAT3-201ENST00000426539 TNFAIP3P21580 790 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 RBMS1P29558 406 aaKnown RBP10.1□□□□□ -0.79
GACAT3-201ENST00000426539 MIPP30301 263 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 BLKP51451 505 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 CCL7P80098 99 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 CLN3Q13286 438 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 MTM1Q13496 603 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 DPYSQ14117 519 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 SPIDRQ14159 915 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 GRM3Q14832 879 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 ELOCQ15369 112 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 ERMARDQ5T6L9 678 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 BROXQ5VW32 411 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 ERAP2Q6P179 960 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 FOXR1Q6PIV2 292 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 LIPIQ6XZB0 460 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 ZNF571Q7Z3V5 609 aaPredicted RBP10.1□□□□□ -0.79
GACAT3-201ENST00000426539 CLEC14AQ86T13 490 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 SDR16C5Q8N3Y7 309 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 AOPEPQ8N6M6 819 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 GPR156Q8NFN8 814 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 WDR36Q8NI36 951 aaKnown RBP10.1□□□□□ -0.79
GACAT3-201ENST00000426539 TTC9Q92623 222 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 WDR92Q96MX6 357 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 RBM15Q96T37 977 aaKnown RBP eCLIP10.1□□□□□ -0.79
GACAT3-201ENST00000426539 DPH1Q9BZG8 443 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 SEMA4CQ9C0C4 833 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 FGF22Q9HCT0 170 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 MRPL40Q9NQ50 206 aaKnown RBP10.1□□□□□ -0.79
GACAT3-201ENST00000426539 PARVAQ9NVD7 372 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 KLQ9UEF7 1012 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 GPR34Q9UPC5 381 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 DGKBQ9Y6T7 804 aa10.1□□□□□ -0.79
GACAT3-201ENST00000426539 RP1P56715 2156 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 SHROOM3Q8TF72 1996 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 CCDC187A0A096LP49 1063 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 CFAP69A5D8W1 941 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 A8MX80 341 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 EIF3CLB5ME19 914 aaKnown RBP10.09□□□□□ -0.79
GACAT3-201ENST00000426539 D6RAR5 112 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 DFFAO00273 331 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 DDX3XO00571 662 aaKnown RBP eCLIP10.09□□□□□ -0.79
GACAT3-201ENST00000426539 EFSO43281 561 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 NOBOXO60393 691 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 LRCH4O75427 683 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 PEX11BO96011 259 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 RPLP0P05388 317 aaKnown RBP10.09□□□□□ -0.79
GACAT3-201ENST00000426539 CTSEP14091 401 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 PLA2G2AP14555 144 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 TCF4P15884 667 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 IL1R2P27930 398 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 HTR1BP28222 390 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 SERPINA4P29622 427 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 TRIM23P36406 574 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 UCNP55089 124 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 KIAA1024LP59773 190 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 CFHR1Q03591 330 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 IL10RBQ08334 325 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 VAC14Q08AM6 782 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 NSUN2Q08J23 767 aaKnown RBP eCLIP10.09□□□□□ -0.79
GACAT3-201ENST00000426539 TSR1Q2NL82 804 aaKnown RBP10.09□□□□□ -0.79
GACAT3-201ENST00000426539 CFAP58Q5T655 872 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 OGFOD3Q6PK18 319 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 DPPA4Q7L190 304 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 GKN2Q86XP6 184 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 CCL4L1Q8NHW4 92 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 WDR48Q8TAF3 677 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 FNIP1Q8TF40 1166 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 LIN37Q96GY3 246 aaPredicted RBP10.09□□□□□ -0.79
GACAT3-201ENST00000426539 EIF3CQ99613 913 aaKnown RBP10.09□□□□□ -0.79
GACAT3-201ENST00000426539 CINPQ9BW66 212 aaPredicted RBP10.09□□□□□ -0.79
GACAT3-201ENST00000426539 LGR4Q9BXB1 951 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 FOXP3Q9BZS1 431 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 HAUS4Q9H6D7 363 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 ATP13A3Q9H7F0 1226 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 SYNDIG1Q9H7V2 258 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 CWC15Q9P013 229 aaKnown RBP10.09□□□□□ -0.79
GACAT3-201ENST00000426539 MYO6Q9UM54 1294 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 DOLKQ9UPQ8 538 aa10.09□□□□□ -0.79
GACAT3-201ENST00000426539 K7ENP7 123 aa10.08□□□□□ -0.8
GACAT3-201ENST00000426539 PLD2O14939 933 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms