RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 LILRA4P59901 499 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 SLC39A12Q504Y0 691 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 HTRA1Q92743 480 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 TMEM109Q9BVC6 243 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 BRD7Q9NPI1 651 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 ABCC13Q9NSE7 274 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 SGK1O00141 431 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 KATNA1O75449 491 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 MLLT3P42568 568 aaPredicted RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 DEFA1P59665 94 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 DEFA3P59666 94 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 NME3Q13232 169 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 C10orf120Q5SQS8 335 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 PGM2L1Q6PCE3 622 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 APTXQ7Z2E3 356 aaKnown RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 HASPINQ8TF76 798 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 PPP1R13LQ8WUF5 828 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 C10orf82Q8WW14 230 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 OXNAD1Q96HP4 312 aaPredicted RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 DUSP16Q9BY84 665 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 R3HDMLQ9H3Y0 253 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 SLCO1B3Q9NPD5 702 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 B3GNT3Q9Y2A9 372 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 SNX13Q9Y5W8 968 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 SMIM18P0DKX4 95 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 ALAS2P22557 587 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 AIF1P55008 147 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 JAM2P57087 298 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 YWHAZP63104 245 aaKnown RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 FLOT2Q14254 428 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 PDK1Q15118 436 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 INTS6LQ5JSJ4 861 aaKnown RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 C6orf52Q5T4I8 152 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 RNF219Q5W0B1 726 aaPredicted RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 FAM205BPQ63HN1 556 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 PDE12Q6L8Q7 609 aaKnown RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 HERC6Q8IVU3 1022 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 GSTCDQ8NEC7 633 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 ADAMTS16Q8TE57 1224 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 KLHL32Q96NJ5 620 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 KCNK16Q96T55 309 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 THAP2Q9H0W7 228 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 POLMQ9NP87 494 aaPredicted RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 PNPLA3Q9NST1 481 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 POLR3BQ9NW08 1133 aaPredicted RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 TAS2R1Q9NYW7 299 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 NPPAP01160 153 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 MAPK10P53779 464 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 MLLT6P55198 1093 aaPredicted RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 DNASE1L3Q13609 305 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 DHRS4L2Q6PKH6 230 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 GALNT12Q8IXK2 581 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 CCNYQ8ND76 341 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 TTLQ8NG68 377 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 SLC7A14Q8TBB6 771 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 CCDC120Q96HB5 630 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 CLPTM1LQ96KA5 538 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 PANX3Q96QZ0 392 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 PSD2Q9BQI7 771 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 COQ3Q9NZJ6 369 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 CCDC59Q9P031 241 aaKnown RBP9.86□□□□□ -0.83
USP54-205ENST00000424265 ARMCX1Q9P291 453 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 STOML2Q9UJZ1 356 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 ALG6Q9Y672 507 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 NCANO14594 1321 aa9.86□□□□□ -0.83
USP54-205ENST00000424265 HDAC3O15379 428 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 ATMINO43313 823 aaPredicted RBP9.85□□□□□ -0.83
USP54-205ENST00000424265 IFI30P13284 250 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 CD300CQ08708 224 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 KCNT1Q5JUK3 1230 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 MARCH8Q5T0T0 291 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 SLC20A1Q8WUM9 679 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 MANSC1Q9H8J5 431 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 POPDC2Q9HBU9 364 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 PAK6Q9NQU5 681 aaPredicted RBP9.85□□□□□ -0.83
USP54-205ENST00000424265 IARS2Q9NSE4 1012 aaKnown RBP9.85□□□□□ -0.83
USP54-205ENST00000424265 C20orf96Q9NUD7 363 aaPredicted RBP9.85□□□□□ -0.83
USP54-205ENST00000424265 TBC1D13Q9NVG8 400 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 ACTR3BQ9P1U1 418 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 CLUHO75153 1309 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 RBAK-RBAKDNI3L0D1 243 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 ENPP3O14638 875 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 PEX1O43933 1283 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 SCNN1AP37088 669 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 CDH8P55286 799 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 LRRC38Q5VT99 294 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 C4orf33Q8N1A6 199 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 LINC01465Q8N7H1 131 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 SEMA4DQ92854 862 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 RBM14Q96PK6 669 aaKnown RBP9.85□□□□□ -0.83
USP54-205ENST00000424265 TMEM246Q9BRR3 403 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 MEI4A8MW99 385 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 ZBTB42B2RXF5 422 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 AP1G1O43747 822 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 CCNT2O60583 730 aaKnown RBP9.85□□□□□ -0.83
USP54-205ENST00000424265 CHRNA1P02708 482 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 T-ENOLP0DO92 83 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 MYL2P10916 166 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 TLR1Q15399 786 aa9.85□□□□□ -0.83
USP54-205ENST00000424265 ZBED5Q49AG3 693 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms