RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 TRIM72Q6ZMU5 477 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 TRAPPC11Q7Z392 1133 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 AMZ2Q86W34 360 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 ZNF280BQ86YH2 543 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 CCDC13Q8IYE1 715 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 BBS5Q8N3I7 341 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 NUDT10Q8NFP7 164 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 OR13C2Q8NGS9 318 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 MBD3L2Q8NHZ7 208 aaPredicted RBP5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 C17orf50Q8WW18 174 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 IP6K1Q92551 441 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 KAT2AQ92830 837 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 NUDT11Q96G61 164 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 EPSTI1Q96J88 318 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 HNRNPABQ99729 332 aaKnown RBP5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 SPATA25Q9BR10 227 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 PAAF1Q9BRP4 392 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 LRRCC1Q9C099 1032 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 EPHX3Q9H6B9 360 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 USP29Q9HBJ7 922 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 TUFT1Q9NNX1 390 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 CD320Q9NPF0 282 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 ARL8BQ9NVJ2 186 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 DNAJC17Q9NVM6 304 aaKnown RBP5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 SMPD3Q9NY59 655 aaPredicted RBP5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 JKAMPQ9P055 326 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 NTMQ9P121 344 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 CRNNQ9UBG3 495 aaPredicted RBP5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 CCPG1Q9ULG6 757 aa5.61□□□□□ -1.51
PTP4A1P1-201ENST00000420539 UNC13AQ9UPW8 1703 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 ATRNL1Q5VV63 1379 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 A0A087WV48 116 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 A0A0G2JNJ9 132 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 EDDM13A0A1B0GTR0 161 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 TCRBV7S2A1N4TA0A589 114 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 MBD3L5A6NJ08 208 aaPredicted RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 E2F3O00716 465 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 SLC30A4O14863 429 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 KIAA0391O15091 583 aaKnown RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 SMAD6O43541 496 aaKnown RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 RGS10O43665 173 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 BUB1O43683 1085 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 HS6ST1O60243 411 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 MITFO75030 526 aaPredicted RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 MTX2O75431 263 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 ITGA10O75578 1167 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 NPPAP01160 153 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 IL1AP01583 271 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 S100A9P06702 114 aaKnown RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 ZNF28P17035 718 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 ADRA2CP18825 462 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 FDXRP22570 491 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 NR2F2P24468 414 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 YY1P25490 414 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 CD27P26842 260 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 NTSR1P30989 418 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 CSF2RBP32927 897 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 THBS4P35443 961 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 HNF1BP35680 557 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 EPS15P42566 896 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 CRKLP46109 303 aaKnown RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 RAP1GAPP47736 663 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 OR1G1P47890 313 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 PTTG1IPP53801 180 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 RRADP55042 308 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 UBE2HP62256 183 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 RBM6P78332 1123 aaKnown RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 TFAP4Q01664 338 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 DLX2Q07687 328 aaPredicted RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 DDX39BQ13838 428 aaKnown RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 RUNX2Q13950 521 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 GALNT3Q14435 633 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 CEBPEQ15744 281 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 FAM187BQ17R55 369 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 ZIK1Q3SY52 487 aaPredicted RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 FUT11Q495W5 492 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 MCMDC2Q4G0Z9 681 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 HERC4Q5GLZ8 1057 aaPredicted RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 MDH1BQ5I0G3 518 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 NOMO2Q5JPE7 1267 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 TCTE1Q5JU00 501 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 PRR31Q5SQ13 230 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 SPATA46Q5T0L3 261 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 ATAD3BQ5T9A4 648 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 METTL11BQ5VVY1 283 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 NOTUMQ6P988 496 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 NHLRC1Q6VVB1 395 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 GLDNQ6ZMI3 551 aaPredicted RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 CXXC5Q7LFL8 322 aaKnown RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 TAS2R42Q7RTR8 314 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 VASH2Q86V25 355 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 P3H2Q8IVL5 708 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 ZNF679Q8IYX0 411 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 ABRAQ8N0Z2 381 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 AGBL3Q8NEM8 1001 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 OR8K5Q8NH50 307 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 LRRC8CQ8TDW0 803 aa5.6□□□□□ -1.51
PTP4A1P1-201ENST00000420539 PTPMT1Q8WUK0 201 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms