RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 C3orf20Q8ND61 904 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 OR2T3Q8NH03 318 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 RXFP2Q8WXD0 754 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 RMDN1Q96DB5 314 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 SELENOOQ9BVL4 669 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 SIK2Q9H0K1 926 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 SMOC1Q9H4F8 434 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 PRDM16Q9HAZ2 1276 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 PRSS16Q9NQE7 514 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 VPS45Q9NRW7 570 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 TMEM51Q9NW97 253 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 USP36Q9P275 1121 aaKnown RBP7.1□□□□□ -1.27
HMGN1-205ENST00000419378 PPARGC1AQ9UBK2 798 aaKnown RBP7.1□□□□□ -1.27
HMGN1-205ENST00000419378 GULP1Q9UBP9 304 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 PLA2G4CQ9UP65 541 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 SNX10Q9Y5X0 201 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.1□□□□□ -1.27
HMGN1-205ENST00000419378 NUP205Q92621 2012 aa7.1□□□□□ -1.27
HMGN1-205ENST00000419378 ATXN2Q99700 1313 aaKnown RBP7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.09□□□□□ -1.27
HMGN1-205ENST00000419378 A0A1W2PQJ5 194 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 TCRBV5S1A1TA0A578 114 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 PRR5-ARHGAP8B1AHC4 643 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 FOXD2O60548 495 aaPredicted RBP7.09□□□□□ -1.27
HMGN1-205ENST00000419378 CLDN11O75508 207 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 CNTN5O94779 1100 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ENDOD1O94919 500 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 SRPRAP08240 638 aaKnown RBP7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ZNF806P0C7X5 589 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 KRT3P12035 628 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 NAT1P18440 290 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 GPD1P21695 349 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 CD6P30203 668 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 RFC1P35251 1148 aaPredicted RBP7.09□□□□□ -1.27
HMGN1-205ENST00000419378 IGFALSP35858 605 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 PBX1P40424 430 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 PRKCIP41743 596 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 PTGER3P43115 390 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 NUMBP49757 651 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 CDH4P55283 916 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 UBASH3AP57075 661 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ST8SIA6P61647 398 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ARHGAP8P85298 464 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ECT2LQ008S8 904 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ZNF177Q13360 481 aaPredicted RBP7.09□□□□□ -1.27
HMGN1-205ENST00000419378 SLC12A1Q13621 1099 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 SF3A2Q15428 464 aaKnown RBP7.09□□□□□ -1.27
HMGN1-205ENST00000419378 CDO1Q16878 200 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 HNRNPA1L2Q32P51 320 aaKnown RBP7.09□□□□□ -1.27
HMGN1-205ENST00000419378 RAB6CQ53S08 254 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ALFQ53S48 1182 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 FIGNQ5HY92 759 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ARTNQ5T4W7 220 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 SFMBT2Q5VUG0 894 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 LYSMD4Q5XG99 296 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 TCEAL6Q6IPX3 200 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ACAD10Q6JQN1 1059 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 DNAJC24Q6P3W2 148 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 STRADAQ7RTN6 431 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 TMPRSS6Q8IU80 811 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 KDM1BQ8NB78 822 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 OR52K2Q8NGK3 314 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 PCDH19Q8TAB3 1148 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 FAM172AQ8WUF8 416 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 PRCCQ92733 491 aaPredicted RBP7.09□□□□□ -1.27
HMGN1-205ENST00000419378 TCEAL3Q969E4 200 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 SIPA1Q96FS4 1042 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 C1orf74Q96LT6 269 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 MCEEQ96PE7 176 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 HAPLN3Q96S86 360 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 EDEM3Q9BZQ6 932 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 RAB6CQ9H0N0 254 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 MTG2Q9H4K7 406 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 HAUS4Q9H6D7 363 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 MBNL3Q9NUK0 354 aaKnown RBP7.09□□□□□ -1.27
HMGN1-205ENST00000419378 C19orf73Q9NVV2 129 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 TAS2R14Q9NYV8 317 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 AIPL1Q9NZN9 384 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 ERVW-1Q9UQF0 538 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 TBC1D30Q9Y2I9 924 aa7.09□□□□□ -1.27
HMGN1-205ENST00000419378 NYNRINQ9P2P1 1898 aaKnown RBP7.09□□□□□ -1.28
HMGN1-205ENST00000419378 GON4LQ3T8J9 2241 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ITIH6Q6UXX5 1313 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 IGLV3-10A0A075B6K4 115 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.08□□□□□ -1.28
HMGN1-205ENST00000419378 SIGLEC16A6NMB1 481 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 DRGXA6NNA5 263 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 NOTOA8MTQ0 251 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 TMCO5BA8MYB1 307 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 TTC34A8MYJ7 566 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 PATE3B3GLJ2 98 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 E9PAM4 449 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 DDX3XO00571 662 aaKnown RBP eCLIP7.08□□□□□ -1.285e-16■■■■□ 25.2
HMGN1-205ENST00000419378 AP5Z1O43299 807 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 CCP110O43303 1012 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 NDUFS2O75306 463 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 IGLV3-19P01714 112 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 RHOCP08134 193 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 JMJD7P0C870 316 aa7.08□□□□□ -1.28
HMGN1-205ENST00000419378 ACADMP11310 421 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms