RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 DSC2Q02487 901 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 PDE1CQ14123 709 aaPredicted RBP20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 PROX2Q3B8N5 592 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 KCTD16Q68DU8 428 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 TIGD7Q6NT04 549 aaPredicted RBP20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 EID2Q8N6I1 236 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 PLA2G15Q8NCC3 412 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 ACRBPQ8NEB7 543 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 KRT35Q92764 455 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 COQ10AQ96MF6 247 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 SMIM14Q96QK8 99 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 IL12RB2Q99665 862 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 SEMA3CQ99985 751 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 RBM22Q9NW64 420 aaKnown RBP eCLIP20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 DDX56Q9NY93 547 aaKnown RBP20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 AMACRQ9UHK6 382 aa20.72■□□□□ 0.91
PKNOX1-202ENST00000418336 TDRD6O60522 2096 aaKnown RBP20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 FREM2Q5SZK8 3169 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 LY6G6EA0A0G2JKS1 128 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 TRIM16O95361 564 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 CCNB1P14635 433 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 MX2P20592 715 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 IFI35P80217 286 aaPredicted RBP20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 PARGQ86W56 976 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 CCDC13Q8IYE1 715 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 KATNAL2Q8IYT4 538 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 GATA6Q92908 595 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 HERPUD2Q9BSE4 406 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 TCEAL2Q9H3H9 227 aaPredicted RBP20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 NEUROG3Q9Y4Z2 214 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 U3KQA8 63 aa20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 MAP1BP46821 2468 aaKnown RBP20.71■□□□□ 0.91
PKNOX1-202ENST00000418336 NPIPB15A6NHN6 443 aaPredicted RBP20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 TOR1BO14657 336 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 APOL1O14791 398 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 SPOPO43791 374 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 CPP00450 1065 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 KRT10P13645 584 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 XPAP23025 273 aaPredicted RBP20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 NOP2P46087 812 aaKnown RBP20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 ACADVLP49748 655 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 YPEL5P62699 121 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 DNAJC3Q13217 504 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 LRRC14Q15048 493 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 CNGA3Q16281 694 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 SPOCD1Q6ZMY3 1216 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 BBS5Q8N3I7 341 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 LRRC57Q8N9N7 239 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 SCRN2Q96FV2 425 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 TDRD1Q9BXT4 1180 aaKnown RBP20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 POLR1EQ9GZS1 481 aaKnown RBP20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 IMPACTQ9P2X3 320 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 FTSJ1Q9UET6 329 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 RAI2Q9Y5P3 530 aa20.7■□□□□ 0.9
PKNOX1-202ENST00000418336 hCG_1818297A0A087WSY0 165 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 A0A0U1RQS6 177 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 A0A1W2PQ67 120 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 KCNK1O00180 336 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 ENC1O14682 589 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 RECQL5O94762 991 aaPredicted RBP20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 PECAM1P16284 738 aaPredicted RBP20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 POLR2LP62875 67 aaKnown RBP20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 SPA17Q15506 151 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 CFAP58Q5T655 872 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 OR4C6Q8NH72 309 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 NSMCE1Q8WV22 266 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 TADA1Q96BN2 335 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 CNDP2Q96KP4 475 aaKnown RBP20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 BAG1Q99933 345 aaPredicted RBP20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 DNAJC28Q9NX36 388 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 SAE1Q9UBE0 346 aaPredicted RBP20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 PHTF1Q9UMS5 762 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 APOBEC2Q9Y235 224 aaKnown RBP20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 MSRB2Q9Y3D2 182 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 HEY1Q9Y5J3 304 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 EPG5Q9HCE0 2579 aa20.69■□□□□ 0.9
PKNOX1-202ENST00000418336 USP24Q9UPU5 2620 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 A8MX80 341 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 SIGLEC6O43699 453 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 HEXIM1O94992 359 aaKnown RBP20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 LDOC1O95751 146 aaPredicted RBP20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 JCHAINP01591 159 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 CAPNS1P04632 268 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 TNNT1P13805 278 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 VIPR1P32241 457 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 CTNNA1P35221 906 aaKnown RBP20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 TRIM23P36406 574 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 PEX5P50542 639 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 VAV2P52735 878 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 SKOR1P84550 965 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 ZNF211Q13398 564 aaPredicted RBP20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 INPP5AQ14642 412 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 PRKD1Q15139 912 aaPredicted RBP20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 CDKN3Q16667 212 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 INAVAQ3KP66 663 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 MACC1Q6ZN28 852 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 B4GALNT4Q76KP1 1039 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 TSPAN33Q86UF1 283 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 RFX6Q8HWS3 928 aa20.68■□□□□ 0.9
PKNOX1-202ENST00000418336 RBFAQ8N0V3 343 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms