RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CPSF6Q16630 551 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 MZT2AQ6P582 158 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 ADAMTSL2Q86TH1 951 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 FAM98AQ8NCA5 519 aaKnown RBP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 TEX47Q8TBZ9 253 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 PDCD10Q9BUL8 212 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 DUS2Q9NX74 493 aaKnown RBP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 A0A1W2PQH9 124 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 E7ENQ6 273 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 OTCP00480 354 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 LAG3P18627 525 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 SMIM11AP58511 58 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 PPIGQ13427 754 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 ACAP2Q15057 778 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 C9orf57Q5W0N0 161 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 TRIM40Q6P9F5 258 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 SCIMPQ6UWF3 145 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 ETNPPLQ8TBG4 499 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 LRRC39Q96DD0 335 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 PANX1Q96RD7 426 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 CLCC1Q96S66 551 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 BRINP2Q9C0B6 783 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 NXF3Q9H4D5 531 aaKnown RBP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 DNAJC18Q9H819 358 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 TMEM138Q9NPI0 162 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 NDUFA13Q9P0J0 144 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 DAPK2Q9UIK4 370 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 TRBV23OR9-2A0A075B6M9 112 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 SERPINB7O75635 380 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 GIMD1P0DJR0 217 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 RAB10P61026 200 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 TAPT1Q6NXT6 567 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 NUAK2Q9H093 628 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 PHPT1Q9NRX4 125 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 IKZF3Q9UKT9 509 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 FCHO1O14526 889 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 OR10H3O60404 316 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 ATG13O75143 517 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 C1RP00736 705 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 CXCR3P49682 368 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 DEF8Q6ZN54 512 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 DHRSXQ8N5I4 330 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 LMLNQ96KR4 655 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 FAM198AQ9UFP1 575 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 PSMD13Q9UNM6 376 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 BTRCQ9Y297 605 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 MRPS7Q9Y2R9 242 aaKnown RBP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 DEPDC5O75140 1603 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 RHPN2P1A8MT19 583 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 NFATC1O95644 943 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 CES1P23141 567 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 CDC42P60953 191 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 DGUOKQ16854 277 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 HPS6Q86YV9 775 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 HDAC10Q969S8 669 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 COQ7Q99807 217 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 DUSP16Q9BY84 665 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 SGK2Q9HBY8 427 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 NINJ2Q9NZG7 142 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 LIN7AO14910 233 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 PPP1R26Q5T8A7 1209 aaPredicted RBP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 TMC3Q7Z5M5 1100 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 FAM129CQ86XR2 697 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 TCF25Q9BQ70 676 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 MRPL57Q9BQC6 102 aaKnown RBP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 PIGUQ9H490 435 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 MCUBQ9NWR8 336 aa11.25□□□□□ -0.61
PTCH1-205ENST00000418258 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTCH1-205ENST00000418258 ATP9AO75110 1047 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 PAGE1O75459 146 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 LINC00032P0C843 101 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 CORO1AP31146 461 aaKnown RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 MAPK10P53779 464 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 UBXN2BQ14CS0 331 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 C1orf186Q6ZWK4 172 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 UBE2R2Q712K3 238 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 COMMD9Q9P000 198 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 PTGFRNQ9P2B2 879 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 CYP3A4P08684 503 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 ADRA1DP25100 572 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 OMPP47874 163 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SMARCB1Q12824 385 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 ITGADQ13349 1161 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SAPCD2Q86UD0 394 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 MON1AQ86VX9 555 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 C17orf64Q86WR6 236 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SPATA6LQ8N4H0 392 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 CDYL2Q8N8U2 506 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 MTMR8Q96EF0 704 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 MYO19Q96H55 970 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 CDT1Q9H211 546 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 MYRFQ9Y2G1 1151 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 C2CD2Q9Y426 696 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 LMTK2Q8IWU2 1503 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 OR6C75A6NL08 312 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 H3BM21 787 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SNRPB2P08579 225 aaKnown RBP11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SELPP16109 830 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 IL12RB1P42701 662 aa11.24□□□□□ -0.61
PTCH1-205ENST00000418258 SSR2P43308 183 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms