RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 CLEC18CQ8NCF0 446 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 CELF6Q96J87 481 aaKnown RBP18.17■□□□□ 0.5
VCP-202ENST00000417448 KLC2Q9H0B6 622 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 NOL6Q9H6R4 1146 aaKnown RBP18.17■□□□□ 0.5
VCP-202ENST00000417448 TMEM248Q9NWD8 314 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 TRIM10Q9UDY6 481 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 PCDHGA7Q9Y5G6 932 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 CSNK1G3Q9Y6M4 447 aa18.17■□□□□ 0.5
VCP-202ENST00000417448 PLD2O14939 933 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 DAPK3O43293 454 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 AQP9O43315 295 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 BNIP3LO60238 219 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 MTA2O94776 668 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 WT1P19544 449 aaPredicted RBP18.16■□□□□ 0.5
VCP-202ENST00000417448 AIF1P55008 147 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 CYP4F2P78329 520 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 FGL2Q14314 439 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 NR0B2Q15466 257 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 ACBD5Q5T8D3 534 aaPredicted RBP18.16■□□□□ 0.5
VCP-202ENST00000417448 SETD3Q86TU7 594 aaPredicted RBP18.16■□□□□ 0.5
VCP-202ENST00000417448 TP53INP2Q8IXH6 220 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 RHOT2Q8IXI1 618 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 SLC35F3Q8IY50 421 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 LIN37Q96GY3 246 aaPredicted RBP18.16■□□□□ 0.5
VCP-202ENST00000417448 BOCQ9BWV1 1114 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 PCDH18Q9HCL0 1135 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 ETNK2Q9NVF9 386 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 NCKIPSDQ9NZQ3 722 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 VPS51Q9UID3 782 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 ACSL6Q9UKU0 697 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 PCDHGA4Q9Y5G9 962 aa18.16■□□□□ 0.5
VCP-202ENST00000417448 SPTBN1Q01082 2364 aaKnown RBP18.16■□□□□ 0.5
VCP-202ENST00000417448 SPTY2D1-AS1A0A0U1RR47 76 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 ILVBLA1L0T0 632 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 RAD51BO15315 384 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 SPINT1O43278 529 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 SMAD6O43541 496 aaKnown RBP18.15■□□□□ 0.5
VCP-202ENST00000417448 BUB1BO60566 1050 aaPredicted RBP18.15■□□□□ 0.5
VCP-202ENST00000417448 HGFP14210 728 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 ERCC2P18074 760 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 CDH6P55285 790 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 GSDMDP57764 484 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 CLCA4Q14CN2 919 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 BOLA3Q53S33 107 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 KYAT3Q6YP21 454 aaKnown RBP18.15■□□□□ 0.5
VCP-202ENST00000417448 RFX8Q6ZV50 586 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 KIAA1328Q86T90 577 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 PARGQ86W56 976 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 SH2D3CQ8N5H7 860 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 RTL3Q8N8U3 475 aaKnown RBP18.15■□□□□ 0.5
VCP-202ENST00000417448 HTR3CQ8WXA8 447 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 ARHGEF2Q92974 986 aaKnown RBP18.15■□□□□ 0.5
VCP-202ENST00000417448 CCDC3Q9BQI4 270 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 ATP13A1Q9HD20 1204 aa18.15■□□□□ 0.5
VCP-202ENST00000417448 H3BM21 787 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 KPNA3O00505 521 aaPredicted RBP18.14■□□□□ 0.49
VCP-202ENST00000417448 NTN3O00634 580 aaPredicted RBP18.14■□□□□ 0.49
VCP-202ENST00000417448 PPFIA2O75334 1257 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 SFTPCP11686 197 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 COMTP21964 271 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 UGT1A5P35504 534 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 INHBCP55103 352 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 SPIDRQ14159 915 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 KRT81Q14533 505 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 HADHQ16836 314 aaKnown RBP18.14■□□□□ 0.49
VCP-202ENST00000417448 ZFYVE27Q5T4F4 411 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 POLNQ7Z5Q5 900 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 VASH2Q86V25 355 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 ZNF354CQ86Y25 554 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 JAMLQ86YT9 394 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 DCP2Q8IU60 420 aaKnown RBP18.14■□□□□ 0.49
VCP-202ENST00000417448 LRRC8AQ8IWT6 810 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 RBFAQ8N0V3 343 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 LMX1AQ8TE12 382 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 HMCESQ96FZ2 354 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 NCAPGQ9BPX3 1015 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 SLC25A18Q9H1K4 315 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 EPN3Q9H201 632 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 TCEAL2Q9H3H9 227 aaPredicted RBP18.14■□□□□ 0.49
VCP-202ENST00000417448 SYNDIG1Q9H7V2 258 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 SEPT3Q9UH03 358 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 SLC25A13Q9UJS0 675 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 HS3ST3A1Q9Y663 406 aa18.14■□□□□ 0.49
VCP-202ENST00000417448 ICE1Q9Y2F5 2266 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 RASA4BC9J798 803 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 TPP1O14773 563 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 RASA4O43374 803 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 GCATO75600 419 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 ZMPSTE24O75844 475 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 PCDH8O95206 1070 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 IPO7O95373 1038 aaKnown RBP18.13■□□□□ 0.49
VCP-202ENST00000417448 JUNDP17535 347 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 IL4RP24394 825 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 ARHGAP25P42331 645 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 MAPKAPK2P49137 400 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 ARSEP51690 589 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 VAV2P52735 878 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 NAP1L1P55209 391 aaKnown RBP18.13■□□□□ 0.49
VCP-202ENST00000417448 OXCT1P55809 520 aa18.13■□□□□ 0.49
VCP-202ENST00000417448 EIF2B5Q13144 721 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms