RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ATL2Q8NHH9 583 aa14.91□□□□□ -0.02
RPS28-201ENST00000417088 GFM1Q96RP9 751 aaKnown RBP14.91□□□□□ -0.02
RPS28-201ENST00000417088 RBM15Q96T37 977 aaKnown RBP eCLIP14.91□□□□□ -0.02
RPS28-201ENST00000417088 SYT11Q9BT88 431 aa14.91□□□□□ -0.02
RPS28-201ENST00000417088 SEMA4CQ9C0C4 833 aa14.91□□□□□ -0.02
RPS28-201ENST00000417088 HSD3B7Q9H2F3 369 aa14.91□□□□□ -0.02
RPS28-201ENST00000417088 DHX35Q9H5Z1 703 aaKnown RBP14.91□□□□□ -0.02
RPS28-201ENST00000417088 ANO10Q9NW15 660 aa14.91□□□□□ -0.02
RPS28-201ENST00000417088 AP4E1Q9UPM8 1137 aa14.91□□□□□ -0.02
RPS28-201ENST00000417088 DGKBQ9Y6T7 804 aa14.91□□□□□ -0.02
RPS28-201ENST00000417088 TMEM202A6NGA9 273 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 D6RAR5 112 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 PLD2O14939 933 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 PALMO75781 387 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 RECQL5O94762 991 aaPredicted RBP14.9□□□□□ -0.02
RPS28-201ENST00000417088 RPLP0P05388 317 aaKnown RBP14.9□□□□□ -0.02
RPS28-201ENST00000417088 PSMA2P25787 234 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 SERPINA4P29622 427 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 RALGDSQ12967 914 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 NCAPHQ15003 741 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 PLEKHA7Q6IQ23 1121 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 ARHGAP12Q8IWW6 846 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 FBXO39Q8N4B4 442 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 GPR156Q8NFN8 814 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 OR1E3Q8WZA6 343 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 FUBP1Q96AE4 644 aaKnown RBP14.9□□□□□ -0.02
RPS28-201ENST00000417088 ECHDC3Q96DC8 303 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 PEBP4Q96S96 227 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 KCTD15Q96SI1 283 aaPredicted RBP14.9□□□□□ -0.02
RPS28-201ENST00000417088 SNRNP25Q9BV90 132 aaKnown RBP14.9□□□□□ -0.02
RPS28-201ENST00000417088 ATP13A3Q9H7F0 1226 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 EPB41L5Q9HCM4 733 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 FGF22Q9HCT0 170 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 PCSK1NQ9UHG2 260 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 LRP4O75096 1905 aa14.9□□□□□ -0.02
RPS28-201ENST00000417088 EIF3CLB5ME19 914 aaKnown RBP14.89□□□□□ -0.03
RPS28-201ENST00000417088 CCDC172P0C7W6 258 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 ERCC2P18074 760 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 CDK11BP21127 795 aaKnown RBP14.89□□□□□ -0.03
RPS28-201ENST00000417088 TNFAIP3P21580 790 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 UGT1A5P35504 534 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 INHBCP55103 352 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 KIAA1024LP59773 190 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 BCL2L1Q07817 233 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 NSUN2Q08J23 767 aaKnown RBP eCLIP14.89□□□□□ -0.03
RPS28-201ENST00000417088 EIF3IQ13347 325 aaKnown RBP14.89□□□□□ -0.03
RPS28-201ENST00000417088 LY6DQ14210 128 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 ERMARDQ5T6L9 678 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 KIAA1614Q5VZ46 1190 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 OGFOD3Q6PK18 319 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 SASS6Q6UVJ0 657 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 LIPIQ6XZB0 460 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 CCDC81Q6ZN84 652 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 ARHGAP36Q6ZRI8 547 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 RFX8Q6ZV50 586 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 RAB11FIP2Q7L804 512 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 NPWQ8N729 165 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 OR6C4Q8NGE1 309 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 OR56A4Q8NGH8 313 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 NSMCE3Q96MG7 304 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 EIF3CQ99613 913 aaKnown RBP14.89□□□□□ -0.03
RPS28-201ENST00000417088 CINPQ9BW66 212 aaPredicted RBP14.89□□□□□ -0.03
RPS28-201ENST00000417088 FOXP3Q9BZS1 431 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 LRRN3Q9H3W5 708 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 MRPL40Q9NQ50 206 aaKnown RBP14.89□□□□□ -0.03
RPS28-201ENST00000417088 PARVAQ9NVD7 372 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 PCDHGA7Q9Y5G6 932 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 UNC13CQ8NB66 2214 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 PIEZO2Q9H5I5 2752 aa14.89□□□□□ -0.03
RPS28-201ENST00000417088 ASH1LQ9NR48 2969 aaKnown RBP14.88□□□□□ -0.03
RPS28-201ENST00000417088 TMEM191CA6NGB0 347 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 TMCO5BA8MYB1 307 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 TMX2-CTNND1H3BSU7 103 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 CACNB4O00305 520 aaPredicted RBP14.88□□□□□ -0.03
RPS28-201ENST00000417088 TRAFD1O14545 582 aaPredicted RBP14.88□□□□□ -0.03
RPS28-201ENST00000417088 EFSO43281 561 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 DAPK3O43293 454 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 ATMINO43313 823 aaPredicted RBP14.88□□□□□ -0.03
RPS28-201ENST00000417088 NOBOXO60393 691 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 GM2AP17900 193 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 SLC5A2P31639 672 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 CCKBRP32239 447 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 TRIM23P36406 574 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 RFTN1Q14699 578 aaPredicted RBP14.88□□□□□ -0.03
RPS28-201ENST00000417088 STX1AQ16623 288 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 ZSCAN23Q3MJ62 389 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 CYP4V2Q6ZWL3 525 aaPredicted RBP14.88□□□□□ -0.03
RPS28-201ENST00000417088 DPPA4Q7L190 304 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 TAF8Q7Z7C8 310 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 SFTPA2Q8IWL1 248 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 PELI3Q8N2H9 469 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 Q8N9G6 341 aaPredicted RBP14.88□□□□□ -0.03
RPS28-201ENST00000417088 TMEM74Q96NL1 305 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 TRIM7Q9C029 511 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 STRADBQ9C0K7 418 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 SP110Q9HB58 689 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.88□□□□□ -0.03
RPS28-201ENST00000417088 APPL1Q9UKG1 709 aa14.88□□□□□ -0.03
RPS28-201ENST00000417088 A8MX80 341 aa14.87□□□□□ -0.03
RPS28-201ENST00000417088 DFFAO00273 331 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms