RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 CPSF6Q16630 551 aaKnown RBP eCLIP12.09□□□□□ -0.47
UBR4-205ENST00000417040 TIGD2Q4W5G0 525 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 ANKRD22Q5VYY1 191 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 GPR152Q8TDT2 470 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 FEM1CQ96JP0 617 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 PRDM12Q9H4Q4 367 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 PDP1Q9P0J1 537 aaPredicted RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 PCDHB5Q9Y5E4 795 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 GPC6Q9Y625 555 aaPredicted RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 KIF20BQ96Q89 1820 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 TSPAN4O14817 238 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 CASKO14936 926 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 ICAM3P32942 547 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 NOMO3P69849 1222 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 PFKPQ01813 784 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 XKR6Q5GH73 641 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 R3HCC1LQ7Z5L2 792 aaKnown RBP12.09□□□□□ -0.47
UBR4-205ENST00000417040 RASGEF1CQ8N431 466 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 REPS2Q8NFH8 660 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 MOSPD2Q8NHP6 518 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 TIMMDC1Q9NPL8 285 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 PCDHGA4Q9Y5G9 962 aa12.09□□□□□ -0.47
UBR4-205ENST00000417040 ACLYP53396 1101 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 EPHB3P54753 998 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 SCRN3Q0VDG4 424 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 ZNF544Q6NX49 715 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 KCTD8Q6ZWB6 473 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 LDB1Q86U70 411 aaPredicted RBP12.08□□□□□ -0.48
UBR4-205ENST00000417040 TRAPPC5Q8IUR0 188 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 WNT8BQ93098 351 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 REPS1Q96D71 796 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 LINGO1Q96FE5 620 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 PPM1MQ96MI6 270 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 CIDEBQ9UHD4 219 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 VPS4AQ9UN37 437 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 TIMM22Q9Y584 194 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 A0A1W2PRG6 482 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 SLC22A3O75751 556 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 DRG2P55039 364 aaKnown RBP12.08□□□□□ -0.48
UBR4-205ENST00000417040 COPZ1P61923 177 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 FSCN1Q16658 493 aaKnown RBP12.08□□□□□ -0.48
UBR4-205ENST00000417040 ARMC12Q5T9G4 340 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 SAMD3Q8N6K7 520 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 PIK3C3Q8NEB9 887 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 CLIP3Q96DZ5 547 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 KCNMB3Q9NPA1 279 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 CLTCQ00610 1675 aaKnown RBP12.08□□□□□ -0.48
UBR4-205ENST00000417040 NOBOXO60393 691 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 IRF8Q02556 426 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 ZNF460Q14592 562 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 SLC27A1Q6PCB7 646 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 DCBLD1Q8N8Z6 715 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 TMEM169Q96HH4 297 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 SERPINB11Q96P15 392 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 RAB26Q9ULW5 256 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 TRAF6Q9Y4K3 522 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 PPRC1Q5VV67 1664 aaKnown RBP12.08□□□□□ -0.48
UBR4-205ENST00000417040 UBE2QL1A1L167 161 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 RFXANKO14593 260 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 ALOX5P09917 674 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 CETPP11597 493 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 PTPN1P18031 435 aaKnown RBP12.08□□□□□ -0.48
UBR4-205ENST00000417040 UGT2B15P54855 530 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 PSMD4P55036 377 aaKnown RBP12.08□□□□□ -0.48
UBR4-205ENST00000417040 UGCGQ16739 394 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 OTOP3Q7RTS5 596 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 OR52J3Q8NH60 311 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 NXNL1Q96CM4 212 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 NLNQ9BYT8 704 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 NRXN1Q9ULB1 1477 aa12.08□□□□□ -0.48
UBR4-205ENST00000417040 FAM237AA0A1B0GTK4 181 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 SLC28A1O00337 649 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 NPR3P17342 541 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 CRHR1P34998 444 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 KCNA10Q16322 511 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 GRIK5Q16478 980 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 GLYATQ6IB77 296 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 ZNF280DQ6N043 979 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 C2orf73Q8N5S3 287 aaPredicted RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 MSL3Q8N5Y2 521 aaKnown RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 SMYD1Q8NB12 490 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 COPS5Q92905 334 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 HDAC10Q969S8 669 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 AZIN2Q96A70 460 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 TMLHEQ9NVH6 421 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 NDOR1Q9UHB4 597 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 CNOT6Q9ULM6 557 aaKnown RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 CHD1O14646 1710 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 CELF2O95319 508 aaKnown RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 MLYCDO95822 493 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 ANXA5P08758 320 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 NOS2P35228 1153 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 BUD31P41223 144 aaPredicted RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 YAP1P46937 504 aaKnown RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 CDK9P50750 372 aaKnown RBP12.07□□□□□ -0.48
UBR4-205ENST00000417040 TGM3Q08188 693 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 TSC22D1Q15714 1073 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 PTPRNQ16849 979 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 ULK1O75385 1050 aa12.07□□□□□ -0.48
UBR4-205ENST00000417040 CHRM5P08912 532 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms