RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 DUSP23Q9BVJ7 150 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 NRSN2Q9GZP1 204 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 SEPT3Q9UH03 358 aa15.19■□□□□ 0.02
UBXN4-203ENST00000416538 BZW2Q9Y6E2 419 aaKnown RBP15.19■□□□□ 0.02
UBXN4-203ENST00000416538 PMS2P1A4D2B8 440 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 A8MX80 341 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 LMO7DNF2Z398 122 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 HTRA2O43464 458 aaPredicted RBP15.18■□□□□ 0.02
UBXN4-203ENST00000416538 RECQL5O94762 991 aaPredicted RBP15.18■□□□□ 0.02
UBXN4-203ENST00000416538 MAP3K6O95382 1288 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 ITPKBP27987 946 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 PDX1P52945 283 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 ADKP55263 362 aaKnown RBP15.18■□□□□ 0.02
UBXN4-203ENST00000416538 TAS2R40P59535 323 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 AP1S1P61966 158 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 INPP5AQ14642 412 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 BOLA3Q53S33 107 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 HS1BP3Q53T59 392 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 C6orf132Q5T0Z8 1188 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 CFAP58Q5T655 872 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 ERAP2Q6P179 960 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 EFL1Q7Z2Z2 1120 aaKnown RBP15.18■□□□□ 0.02
UBXN4-203ENST00000416538 PDZD3Q86UT5 571 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 SFTPA2Q8IWL1 248 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 LZTR1Q8N653 840 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 KYQ8NBH2 561 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 PCDH19Q8TAB3 1148 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 ZNF564Q8TBZ8 553 aaPredicted RBP15.18■□□□□ 0.02
UBXN4-203ENST00000416538 TBATAQ96M53 351 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 SMIM14Q96QK8 99 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 APOOQ9BUR5 198 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 C1QTNF7Q9BXJ2 289 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 FGF22Q9HCT0 170 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 SPASTQ9UBP0 616 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 B4GALT6Q9UBX8 382 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 IP6K2Q9UHH9 426 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 LUC7L2Q9Y383 392 aaKnown RBP15.18■□□□□ 0.02
UBXN4-203ENST00000416538 PCDHGC4Q9Y5F7 938 aa15.18■□□□□ 0.02
UBXN4-203ENST00000416538 ATRXP46100 2492 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 A0A0U1RQS6 177 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 CPED1A4D0V7 1026 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 EME2A4GXA9 379 aaPredicted RBP15.17■□□□□ 0.02
UBXN4-203ENST00000416538 GOLGA6L19H0YKK7 550 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 TPP1O14773 563 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 YY2O15391 372 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 LZTS3O60299 673 aaPredicted RBP15.17■□□□□ 0.02
UBXN4-203ENST00000416538 CSO75390 466 aaKnown RBP15.17■□□□□ 0.02
UBXN4-203ENST00000416538 GP1BAP07359 652 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 LHCGRP22888 699 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 HNRNPH3P31942 346 aaKnown RBP15.17■□□□□ 0.02
UBXN4-203ENST00000416538 GJC1P36383 396 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 HK3P52790 923 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 CDH6P55285 790 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 TPM4P67936 248 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 E2F1Q01094 437 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 PPARDQ03181 441 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 BCL2L1Q07817 233 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 NSUN2Q08J23 767 aaKnown RBP eCLIP15.17■□□□□ 0.02
UBXN4-203ENST00000416538 MTM1Q13496 603 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 DPYSL3Q14195 570 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 PTK2BQ14289 1009 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 ZNF235Q14590 738 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 GSE1Q14687 1217 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 NFKBIBQ15653 356 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 CNGA3Q16281 694 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 ASTE1Q2TB18 679 aaPredicted RBP15.17■□□□□ 0.02
UBXN4-203ENST00000416538 CCDC122Q5T0U0 273 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 NCBP2-AS2Q69YL0 99 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 HID1Q8IV36 788 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 ATPAF2Q8N5M1 289 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 LRRN4Q8WUT4 740 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 OR1E3Q8WZA6 343 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 ZNF599Q96NL3 588 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 IL12RB2Q99665 862 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 USP29Q9HBJ7 922 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 NOD2Q9HC29 1040 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 RABGEF1Q9UJ41 708 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 SALL4Q9UJQ4 1053 aa15.17■□□□□ 0.02
UBXN4-203ENST00000416538 TMEM202A6NGA9 273 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 TOR1BO14657 336 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 ELFN1P0C7U0 828 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 PEX5P50542 639 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 FAM182AQ5T1J6 154 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 FAXCQ5TGI0 409 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 ENPP7Q6UWV6 458 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 SNIP1Q8TAD8 396 aaKnown RBP15.16■□□□□ 0.02
UBXN4-203ENST00000416538 MAPK15Q8TD08 544 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 BTN2A2Q8WVV5 523 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 COQ10AQ96MF6 247 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 BBC3Q96PG8 261 aaPredicted RBP15.16■□□□□ 0.02
UBXN4-203ENST00000416538 NUDCD1Q96RS6 583 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 LGR4Q9BXB1 951 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 SLC13A1Q9BZW2 595 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 MRPL40Q9NQ50 206 aaKnown RBP15.16■□□□□ 0.02
UBXN4-203ENST00000416538 AK5Q9Y6K8 562 aa15.16■□□□□ 0.02
UBXN4-203ENST00000416538 SMG1Q96Q15 3661 aaKnown RBP15.15■□□□□ 0.02
UBXN4-203ENST00000416538 CFAP69A5D8W1 941 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 NPIPB15A6NHN6 443 aaPredicted RBP15.15■□□□□ 0.02
UBXN4-203ENST00000416538 SOCS5O75159 536 aa15.15■□□□□ 0.02
UBXN4-203ENST00000416538 PROSCO94903 275 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms