RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 ELFN1P0C7U0 828 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 SFTPCP11686 197 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 KRT10P13645 584 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 PPM1FP49593 454 aaPredicted RBP15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 POLR2LP62875 67 aaKnown RBP15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 BCL2L1Q07817 233 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 TSR1Q2NL82 804 aaKnown RBP15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 DPY19L2P1Q6NXN4 242 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 C3orf20Q8ND61 904 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 NEK11Q8NG66 645 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 PDXPQ96GD0 296 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 MCEEQ96PE7 176 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 TUBGCP5Q96RT8 1024 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 RBM15Q96T37 977 aaKnown RBP eCLIP15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 CINPQ9BW66 212 aaPredicted RBP15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 ZMYND15Q9H091 742 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 KLC2Q9H0B6 622 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 SP110Q9HB58 689 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 LRIT1Q9P2V4 623 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 NEU3Q9UQ49 428 aa15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 COL27A1Q8IZC6 1860 aaPredicted RBP15.67■□□□□ 0.1
SBDSP1-201ENST00000415772 HELZ2Q9BYK8 2649 aaKnown RBP15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 A0A1W2PQM1 296 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 ARHGAP42A6NI28 874 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 LRRC10BA6NIK2 292 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 PDE2AO00408 941 aaPredicted RBP15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 NVLO15381 856 aaKnown RBP15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 PALMO75781 387 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 CHRNB2P17787 502 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 MMP12P39900 470 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 TYRO3Q06418 890 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 CYTH1Q15438 398 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 TGIF1Q15583 401 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 CLEC16AQ2KHT3 1053 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 C14orf28Q4W4Y0 310 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 CAMK1DQ8IU85 385 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 UMODL1-AS1Q8N2C9 162 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 EXTL1Q92935 676 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 BPIFA3Q9BQP9 254 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 GANQ9H2C0 597 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 NOL6Q9H6R4 1146 aaKnown RBP15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 SUDS3Q9H7L9 328 aaPredicted RBP15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 CYP4F12Q9HCS2 524 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 FANCLQ9NW38 375 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 FZD10Q9ULW2 581 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 RNF215Q9Y6U7 377 aa15.66■□□□□ 0.1
SBDSP1-201ENST00000415772 TSPAN11A1L157 253 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 SIGLEC16A6NMB1 481 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 RHPN2P1A8MT19 583 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 ARHGAP6O43182 974 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 TEX33O43247 280 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 EFSO43281 561 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 RECQL5O94762 991 aaPredicted RBP15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 ITGB2P05107 769 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 PRKCGP05129 697 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 ITIH1P19827 911 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 NFKBIAP25963 317 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 HTR7P34969 479 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 ZNF143P52747 638 aaPredicted RBP15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 KIAA1024LP59773 190 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 ACOX1Q15067 660 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 AGERQ15109 404 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 SRLQ86TD4 932 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 PIM3Q86V86 326 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 GPR156Q8NFN8 814 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 CELF6Q96J87 481 aaKnown RBP15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 CNPY3Q9BT09 278 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 TRIM4Q9C037 500 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 WDR26Q9H7D7 661 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 APPL1Q9UKG1 709 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 DGKBQ9Y6T7 804 aa15.65■□□□□ 0.1
SBDSP1-201ENST00000415772 ZNF462Q96JM2 2506 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 CHD5Q8TDI0 1954 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 PRAMEF33A0A0G2JMD5 474 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 CFAP69A5D8W1 941 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 SMTNL1A8MU46 457 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 WASH4PA8MWX3 477 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 J3KR12 359 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 EEF2KO00418 725 aaKnown RBP15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 PRAMEF10O60809 474 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 UNGP13051 313 aaPredicted RBP15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 PNLIPP16233 465 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 KLK7P49862 253 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 NDST2P52849 883 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 GSCP56915 257 aaPredicted RBP15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 KRT31Q15323 416 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 AMZ1Q400G9 498 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 CERCAMQ5T4B2 595 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 SPECC1LQ69YQ0 1117 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 CAVIN1Q6NZI2 390 aaKnown RBP15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 ATG14Q6ZNE5 492 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 SPRED1Q7Z699 444 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 VASH2Q86V25 355 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 PHF13Q86YI8 300 aaPredicted RBP15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 PLA2G15Q8NCC3 412 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 OR1E3Q8WZA6 343 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 USP7Q93009 1102 aa15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 FUBP1Q96AE4 644 aaKnown RBP15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 DHX35Q9H5Z1 703 aaKnown RBP15.64■□□□□ 0.09
SBDSP1-201ENST00000415772 MRPL40Q9NQ50 206 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms