RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 KCNJ9Q92806 393 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 CADM1Q9BY67 442 aaKnown RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 TAF1DQ9H5J8 278 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 DBNDD1Q9H9R9 158 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 PLEKHA5Q9HAU0 1116 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 G6PC2Q9NQR9 355 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 ATP8A2Q9NTI2 1148 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 TBC1D22BQ9NU19 505 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 RRN3Q9NYV6 651 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 RAI14Q9P0K7 980 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 KLQ9UEF7 1012 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 GJD2Q9UKL4 321 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 PA2G4Q9UQ80 394 aaKnown RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 OSGIN2Q9Y236 505 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 TTLL3Q9Y4R7 772 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 LRRFIP2Q9Y608 721 aaKnown RBP3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 ATP7AQ04656 1500 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 NEXMIFQ5QGS0 1516 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 ADGRF5Q8IZF2 1346 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 ARHGEF10O15013 1369 aa3.89□□□□□ -1.79
HMGB3P23-201ENST00000414981 RGS12O14924 1447 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 CLTCQ00610 1675 aaKnown RBP3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 SYCE3A1L190 88 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 C17orf102A2RUQ5 167 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 EME2A4GXA9 379 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 CLEC18AA5D8T8 446 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 ERICH4A6NGS2 130 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 STMND1H3BQB6 276 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 RNMTO43148 476 aaKnown RBP3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 ATP8B1O43520 1251 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 TIPRLO75663 272 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 TMCC1O94876 653 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 LCATP04180 440 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 UNGP13051 313 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 ENO3P13929 434 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 TYK2P29597 1187 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 AVPR2P30518 371 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 KIF5BP33176 963 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 CHKAP35790 457 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 KRT20P35900 424 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 ENTPD1P49961 510 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 UBASH3AP57075 661 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 KRTAP10-9P60411 292 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 LTBQ06643 244 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 DSC1Q08554 894 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 Q0VFX4 171 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 GPR18Q14330 331 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 SLC45A4Q5BKX6 768 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 RILPL1Q5EBL4 403 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 TMEM268Q5VZI3 342 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 RETSATQ6NUM9 610 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 Q6ZTK2 550 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRILQ7L0X0 811 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 CADM3Q8N126 398 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 VPS52Q8N1B4 723 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 PRR26Q8N8Z3 221 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 MIGA1Q8NAN2 632 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 CLEC18CQ8NCF0 446 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 LILRB1Q8NHL6 650 aaPredicted RBP3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 ELP5Q8TE02 316 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 C2CD4CQ8TF44 421 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 FAR1Q8WVX9 515 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 WASF1Q92558 559 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 TAF4BQ92750 862 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 MIB2Q96AX9 1013 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 ZBTB10Q96DT7 871 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 RSRC1Q96IZ7 334 aaKnown RBP3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 BARD1Q99728 777 aaKnown RBP3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 DCLK3Q9C098 648 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 TWSG1Q9GZX9 223 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 VPS33BQ9H267 617 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 CATSPERBQ9H7T0 1116 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 SEPSECSQ9HD40 501 aaKnown RBP3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 SAYSD1Q9NPB0 183 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 COMMD8Q9NX08 183 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 PDP2Q9P2J9 529 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 SEL1LQ9UBV2 794 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 SRP68Q9UHB9 627 aaKnown RBP3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 KCND3Q9UK17 655 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 TNNQ9UQP3 1299 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 ABCC3O15438 1527 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 PPLO60437 1756 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 ELP1O95163 1332 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 UGGT1Q9NYU2 1555 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 MROH1Q8NDA8 1641 aa3.88□□□□□ -1.79
HMGB3P23-201ENST00000414981 LRRC7Q96NW7 1537 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRIM64A6NGJ6 449 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 HMX3A6NHT5 357 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 TRIM64BA6NI03 449 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 SAC3D1A6NKF1 404 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 C4orf47A7E2U8 309 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 TMEM110-MUSTN1A8MSY1 372 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 INAFM1C9JVW0 142 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 MS4A18H0YCH9 400 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 GTPBP1O00178 669 aaKnown RBP3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 NCAM2O15394 837 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 RGS14O43566 566 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 ADCY5O95622 1261 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 GLUD1P00367 558 aa3.87□□□□□ -1.79
HMGB3P23-201ENST00000414981 CCDC192P0DO97 292 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms