RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 ACBD5Q5T8D3 534 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 ESRP1Q6NXG1 681 aaKnown RBP13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 KYAT3Q6YP21 454 aaKnown RBP13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 UNC45BQ8IWX7 931 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 SLC35F3Q8IY50 421 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 LMX1AQ8TE12 382 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 DQX1Q8TE96 717 aaKnown RBP13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 BTN2A2Q8WVV5 523 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 RNF34Q969K3 372 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 BTBD6Q96KE9 485 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 TBCBQ99426 244 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 DDIT4Q9NX09 232 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 SPASTQ9UBP0 616 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 PADI4Q9UM07 663 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 HS3ST3A1Q9Y663 406 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 CAPN6Q9Y6Q1 641 aa13.71□□□□□ -0.21
RAPGEF1-204ENST00000414781 CTAGE9A4FU28 777 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 MTSS1O43312 755 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 VPS4BO75351 444 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 DDAH2O95865 285 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 JUNDP17535 347 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 CASQ1P31415 396 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 CCR1P32246 355 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 DCTP40126 519 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 CETN2P41208 172 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 CLDN2P57739 230 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 SULT2A1Q06520 285 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 NME3Q13232 169 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 CDO1Q16878 200 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 FAM133BQ5BKY9 247 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 BRMS1LQ5PSV4 323 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 TMEM164Q5U3C3 297 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 ZNF787Q6DD87 383 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 SCYL2Q6P3W7 929 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 POLNQ7Z5Q5 900 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 NT5DC3Q86UY8 548 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 PSTKQ8IV42 348 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 SLC35F6Q8N357 371 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 CARNMT1Q8N4J0 409 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 GPBAR1Q8TDU6 330 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 AZIN2Q96A70 460 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 TBATAQ96M53 351 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 EPAS1Q99814 870 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 TRIM7Q9C029 511 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 WDCPQ9H6R7 721 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 FZD3Q9NPG1 666 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 ZNF71Q9NQZ8 489 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 DDX56Q9NY93 547 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 IPO11Q9UI26 975 aaKnown RBP13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 PPM1HQ9ULR3 514 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 VPS4AQ9UN37 437 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 TLR6Q9Y2C9 796 aa13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 SETD2Q9BYW2 2564 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF1-204ENST00000414781 LMO7DNF2Z398 122 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 STMND1H3BQB6 276 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 PSTPIP1O43586 416 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 ACSL4O60488 711 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 LRCH4O75427 683 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 IGLV3-25P01717 112 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 MIPP30301 263 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 RABIFP47224 123 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 CXCR3P49682 368 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 TBX4P57082 545 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 TAS2R38P59533 333 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 C15orf59Q2T9L4 293 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 LACTB2Q53H82 288 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 MEI1Q5TIA1 1274 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 TRNP1Q6NT89 227 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 MAMDC2Q7Z304 686 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 BNIPLQ7Z465 357 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 MAP7D3Q8IWC1 876 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 GALNT11Q8NCW6 608 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 KLK6Q92876 244 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 RPL10LQ96L21 214 aaKnown RBP13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 C16orf45Q96MC5 204 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 CMKLR1Q99788 373 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 FOXP3Q9BZS1 431 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 CAAP1Q9H8G2 361 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 FOXJ2Q9P0K8 574 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 SFMBT1Q9UHJ3 866 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 DNAI1Q9UI46 699 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 SARDHQ9UL12 918 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 PCDHA3Q9Y5H8 950 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 LRRK1Q38SD2 2015 aa13.69□□□□□ -0.22
RAPGEF1-204ENST00000414781 CELSR2Q9HCU4 2923 aa13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 ZNF891A8MT65 544 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 CAPN5O15484 640 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 LUC7L3O95232 432 aaKnown RBP13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 FTCDO95954 541 aa13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 IGLV3-27P01718 113 aa13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 APOEP02649 317 aa13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 ANXA6P08133 673 aa13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 TNNT1P13805 278 aa13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 CTNNA2P26232 953 aa13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 VASPP50552 380 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 ZNF135P52742 658 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF1-204ENST00000414781 HDAC4P56524 1084 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms