RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 MAN1A1P33908 653 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 ARHGAP25P42331 645 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 YPEL5P62699 121 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 DYNLT1P63172 113 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 PPARDQ03181 441 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 TARDBPQ13148 414 aaKnown RBP eCLIP10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 SMAD1Q15797 465 aaKnown RBP10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 IFI16Q16666 785 aaKnown RBP10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 ODF2Q5BJF6 829 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 ARMC12Q5T9G4 340 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 KCTD16Q68DU8 428 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 CRTC1Q6UUV9 634 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 DPPA4Q7L190 304 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 RFX6Q8HWS3 928 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 PELI3Q8N2H9 469 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 GALNT15Q8N3T1 639 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 TEX26Q8N6G2 289 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 KDF1Q8NAX2 398 aaPredicted RBP10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 RFFLQ8WZ73 363 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 IFT43Q96FT9 208 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 LGMNQ99538 433 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 CEP41Q9BYV8 373 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 SLC13A1Q9BZW2 595 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 CLPBQ9H078 707 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 SUDS3Q9H7L9 328 aaPredicted RBP10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 DTLQ9NZJ0 730 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 APOBEC3BQ9UH17 382 aaKnown RBP10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 MOSPD1Q9UJG1 213 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 PCDHGA1Q9Y5H4 931 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 PCDHA13Q9Y5I0 950 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 PCNX2A6NKB5 2137 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 KNL1Q8NG31 2342 aa10.22□□□□□ -0.77
NCKIPSD-202ENST00000413374 SPEGQ15772 3267 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 GOLGA6CA6NDK9 693 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 GOLGA6BA6NDN3 693 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 TMEM202A6NGA9 273 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 C3orf70A6NLC5 250 aaPredicted RBP10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 KCNK1O00180 336 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 TAF4O00268 1085 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 APOL1O14791 398 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 YY2O15391 372 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 HTRA2O43464 458 aaPredicted RBP10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 SPOPO43791 374 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 PGLSO95336 258 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 HLA-DQB2P05538 268 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 GOLGA6DP0CG33 693 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 KRT10P13645 584 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 CTSEP14091 401 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 CCNB1P14635 433 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 TSHRP16473 764 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 GM2AP17900 193 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 CCNCP24863 283 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 HTR1BP28222 390 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 VIPR1P32241 457 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 HNF1BP35680 557 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 HSPA9P38646 679 aaKnown RBP10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 ETV3P41162 512 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 SRP54P61011 504 aaKnown RBP10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 CYP4F3Q08477 520 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 NIPAL4Q0D2K0 466 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 AP1B1Q10567 949 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 IHHQ14623 411 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 CNGA3Q16281 694 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 CDKN3Q16667 212 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 ALG11Q2TAA5 492 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 HES3Q5TGS1 186 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 KAZNQ674X7 775 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 TIGD7Q6NT04 549 aaPredicted RBP10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 MACC1Q6ZN28 852 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 RFLNAQ6ZTI6 216 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 KDELC2Q7Z4H8 507 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 HSD11B1LQ7Z5J1 315 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 TSPAN33Q86UF1 283 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 TMPRSS12Q86WS5 348 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 LRRC49Q8IUZ0 686 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 RHOT1Q8IXI2 618 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 CCDC13Q8IYE1 715 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 BTN2A2Q8WVV5 523 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 FUBP1Q96AE4 644 aaKnown RBP10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 FAF2Q96CS3 445 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 IL12RB2Q99665 862 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 LRRC61Q9BV99 259 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 LGR4Q9BXB1 951 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 POLR1EQ9GZS1 481 aaKnown RBP10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 CCDC86Q9H6F5 360 aaKnown RBP10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 MRPL40Q9NQ50 206 aaKnown RBP10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 GOLGA6AQ9NYA3 693 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 NLGN3Q9NZ94 848 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 SEPT10Q9P0V9 454 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 SIRPGQ9P1W8 387 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 SAE1Q9UBE0 346 aaPredicted RBP10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 SPASTQ9UBP0 616 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 GULP1Q9UBP9 304 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 CD84Q9UIB8 345 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 LCMT1Q9UIC8 334 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 PHTF1Q9UMS5 762 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 DOLKQ9UPQ8 538 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 CHKBQ9Y259 395 aa10.21□□□□□ -0.77
NCKIPSD-202ENST00000413374 ALG6Q9Y672 507 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms