RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 AMACRQ9UHK6 382 aa17.48■□□□□ 0.39
HSPG2-204ENST00000412328 PPIL1Q9Y3C6 166 aa17.48■□□□□ 0.39
HSPG2-204ENST00000412328 PCDHB9Q9Y5E1 797 aa17.48■□□□□ 0.39
HSPG2-204ENST00000412328 ALG6Q9Y672 507 aa17.48■□□□□ 0.39
HSPG2-204ENST00000412328 EPN1Q9Y6I3 576 aaPredicted RBP17.48■□□□□ 0.39
HSPG2-204ENST00000412328 ZZEF1O43149 2961 aa17.48■□□□□ 0.39
HSPG2-204ENST00000412328 LY6G6EA0A0G2JKS1 128 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 NPIPB15A6NHN6 443 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-204ENST00000412328 TRIM38O00635 465 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 PGLSO95336 258 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 CPP00450 1065 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 MMP2P08253 660 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 CYLC1P35663 651 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-204ENST00000412328 IFI35P80217 286 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-204ENST00000412328 DSC2Q02487 901 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 NIPAL4Q0D2K0 466 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 PTPRRQ15256 657 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 CNGA3Q16281 694 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 KCTD16Q68DU8 428 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 MACC1Q6ZN28 852 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 TMTC1Q8IUR5 882 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 CHCHD4Q8N4Q1 142 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 CNTD1Q8N815 330 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 ACRBPQ8NEB7 543 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 ZNF548Q8NEK5 533 aaPredicted RBP17.47■□□□□ 0.39
HSPG2-204ENST00000412328 TPCN2Q8NHX9 752 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 PIH1D2Q8WWB5 315 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 FUBP1Q96AE4 644 aaKnown RBP17.47■□□□□ 0.39
HSPG2-204ENST00000412328 COQ10AQ96MF6 247 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 LGMNQ99538 433 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 IL12RB2Q99665 862 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 SEMA3CQ99985 751 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 TDRD1Q9BXT4 1180 aaKnown RBP17.47■□□□□ 0.39
HSPG2-204ENST00000412328 POLR1EQ9GZS1 481 aaKnown RBP17.47■□□□□ 0.39
HSPG2-204ENST00000412328 LACRTQ9GZZ8 138 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 DDX56Q9NY93 547 aaKnown RBP17.47■□□□□ 0.39
HSPG2-204ENST00000412328 U3KQA8 63 aa17.47■□□□□ 0.39
HSPG2-204ENST00000412328 DMXL2Q8TDJ6 3036 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 BTNL10A8MVZ5 291 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 TOR1BO14657 336 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 PJA2O43164 708 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 PRLP01236 227 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 PDHA1P08559 390 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 MX2P20592 715 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 XPAP23025 273 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-204ENST00000412328 YPEL5P62699 121 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 DNAJC3Q13217 504 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 ZNF542PQ5EBM4 170 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 FAM182AQ5T1J6 154 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 CFAP58Q5T655 872 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 CCDC13Q8IYE1 715 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 KATNAL2Q8IYT4 538 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 BBS5Q8N3I7 341 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 PLA2G15Q8NCC3 412 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 OR4C6Q8NH72 309 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 KRT35Q92764 455 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 RNF25Q96BH1 459 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-204ENST00000412328 CNDP2Q96KP4 475 aaKnown RBP17.46■□□□□ 0.39
HSPG2-204ENST00000412328 SMIM14Q96QK8 99 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 TCEAL2Q9H3H9 227 aaPredicted RBP17.46■□□□□ 0.39
HSPG2-204ENST00000412328 APOBEC2Q9Y235 224 aaKnown RBP17.46■□□□□ 0.39
HSPG2-204ENST00000412328 DUSP10Q9Y6W6 482 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 BPTFQ12830 3046 aa17.46■□□□□ 0.39
HSPG2-204ENST00000412328 hCG_1818297A0A087WSY0 165 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 A0A1W2PQ67 120 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 ENC1O14682 589 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 APOL1O14791 398 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 SPOPO43791 374 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 RECQL5O94762 991 aaPredicted RBP17.45■□□□□ 0.38
HSPG2-204ENST00000412328 HEXIM1O94992 359 aaKnown RBP17.45■□□□□ 0.38
HSPG2-204ENST00000412328 ELFN1P0C7U0 828 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 CCNB1P14635 433 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 PECAM1P16284 738 aaPredicted RBP17.45■□□□□ 0.38
HSPG2-204ENST00000412328 NOP2P46087 812 aaKnown RBP17.45■□□□□ 0.38
HSPG2-204ENST00000412328 LRRC14Q15048 493 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 SPOCD1Q6ZMY3 1216 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 RBFAQ8N0V3 343 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 NSMCE1Q8WV22 266 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 HERPUD2Q9BSE4 406 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 C1QTNF7Q9BXJ2 289 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 DNAJC28Q9NX36 388 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 MSRB2Q9Y3D2 182 aa17.45■□□□□ 0.38
HSPG2-204ENST00000412328 A0A0U1RQJ8 604 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 C1QTNF9BB2RNN3 333 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 KCNK1O00180 336 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 SIGLEC6O43699 453 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 CAPNS1P04632 268 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 C1QTNF9P0C862 333 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 VIPR1P32241 457 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 POLR2LP62875 67 aaKnown RBP17.44■□□□□ 0.38
HSPG2-204ENST00000412328 MTM1Q13496 603 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 PRKD1Q15139 912 aaPredicted RBP17.44■□□□□ 0.38
HSPG2-204ENST00000412328 SPA17Q15506 151 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 ESRP1Q6NXG1 681 aaKnown RBP17.44■□□□□ 0.38
HSPG2-204ENST00000412328 TSPAN33Q86UF1 283 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 LRRC57Q8N9N7 239 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 TADA1Q96BN2 335 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 SCRN2Q96FV2 425 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 TBATAQ96M53 351 aa17.44■□□□□ 0.38
HSPG2-204ENST00000412328 LRRC61Q9BV99 259 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms