RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SMURF2Q9HAU4 748 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 WASH6PQ9NQA3 447 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 PODXL2Q9NZ53 605 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 TAAR2Q9P1P5 351 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 STOX2Q9P2F5 926 aaPredicted RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 INTUQ9ULD6 942 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPATA2Q9UM82 520 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 EXOGQ9Y2C4 368 aaKnown RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 CLCA3PQ9Y6N3 262 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 BPTFQ12830 3046 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 KIAA0100Q14667 2235 aaKnown RBP-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 DOCK3Q8IZD9 2030 aa-1.5□□□□□ -2.65
RNU4-88P-201ENST00000411220 GON4LQ3T8J9 2241 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 TNRC6BQ9UPQ9 1833 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SPTAN1Q13813 2472 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGLV5-37A0A075B6J1 123 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 A0A087WUV0 522 aaPredicted RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGLV5-52A0A0A0MRZ9 124 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 A0A1W2PPK0 400 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 ODF3BA8MYP8 253 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PPM1DO15297 605 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 TLX2O43763 284 aaPredicted RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 HS6ST1O60243 411 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SLCO2B1O94956 709 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 CD4P01730 458 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGHG3P01860 377 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 AFPP02771 609 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 FESP07332 822 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 INHBAP08476 426 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 LTA4HP09960 611 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 RAP2AP10114 183 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 ACADMP11310 421 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 IMPDH2P12268 514 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 RNASE3P12724 160 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 ARSBP15848 533 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 HNRNPH3P31942 346 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 CTRLP40313 264 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRIM2P49643 509 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 HK3P52790 923 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SLC12A2P55011 1212 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 GPR85P60893 370 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 IGLV3-21P80748 117 aaPredicted RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRKCEQ02156 737 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SSRP1Q08945 709 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRDX4Q13162 271 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 GRAPQ13588 217 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 GRM4Q14833 912 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 DRAP1Q14919 205 aaPredicted RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAM110CQ1W6H9 321 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PTCHD3Q3KNS1 767 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 C3orf36Q3SXR2 165 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 FNDC3BQ53EP0 1204 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SETMARQ53H47 684 aaPredicted RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 C19orf54Q5BKX5 351 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF667Q5HYK9 610 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 C6orf10Q5SRN2 563 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZBTB41Q5SVQ8 909 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 CC2D1BQ5T0F9 858 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 RAET1GQ6H3X3 334 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SLC35E4Q6ICL7 350 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 GUSBP11Q6P575 273 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 IL27RAQ6UWB1 636 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PACS1Q6VY07 963 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 CYHR1Q6ZMK1 362 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRSS48Q7RTY5 328 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 OVCH1Q7RTY7 1134 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 UBE3BQ7Z3V4 1068 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 DENND6AQ8IWF6 608 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZNF683Q8IZ20 524 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 ANKRD13CQ8N6S4 541 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SUMF1Q8NBK3 374 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 IL27Q8NEV9 243 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 DMBX1Q8NFW5 382 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SUN3Q8TAQ9 357 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 FAM110BQ8TC76 370 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 HPSE2Q8WWQ2 592 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 CENPIQ92674 756 aaPredicted RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRCCQ92733 491 aaPredicted RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PTPRN2Q92932 1015 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 TMBIM1Q969X1 311 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 HDAC11Q96DB2 347 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 ZDHHC12Q96GR4 267 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 FRMD6Q96NE9 622 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PRAM1Q96QH2 718 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 RUFY1Q96T51 708 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 DOK1Q99704 481 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 LRRC1Q9BTT6 524 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 MRPL32Q9BYC8 188 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 TMX4Q9H1E5 349 aaPredicted RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 PARP11Q9NR21 331 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 MBNL1Q9NR56 388 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SLTMQ9NWH9 1034 aaKnown RBP eCLIP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SLC39A10Q9ULF5 831 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 TMCC3Q9ULS5 477 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 NAALADL1Q9UQQ1 740 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 OR10H1Q9Y4A9 318 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SUPT16HQ9Y5B9 1047 aaKnown RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 B3GALT1Q9Y5Z6 326 aa-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 SOX21Q9Y651 276 aaPredicted RBP-1.51□□□□□ -2.65
RNU4-88P-201ENST00000411220 RPAP1Q9BWH6 1393 aaPredicted RBP-1.51□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms