RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CDK4P11802 303 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 CKMT1AP12532 417 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 KDELR1P24390 212 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 GBE1Q04446 702 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 SLC10A2Q12908 348 aaPredicted RBP17.79■□□□□ 0.44
LSM5-204ENST00000409909 TRAF2Q12933 501 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 IHHQ14623 411 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 MACC1Q6ZN28 852 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 MAP7D3Q8IWC1 876 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 PAF1Q8N7H5 531 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 TC2NQ8N9U0 490 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 LMX1AQ8TE12 382 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 NSMCE1Q8WV22 266 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 APOLD1Q96LR9 279 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 APOOQ9BUR5 198 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 NT5MQ9NPB1 228 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 B4GALT6Q9UBX8 382 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 OR1A2Q9Y585 309 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 CSNK1G3Q9Y6M4 447 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 APC2O95996 2303 aa17.79■□□□□ 0.44
LSM5-204ENST00000409909 TRABD2BA6NFA1 517 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 C3orf70A6NLC5 250 aaPredicted RBP17.78■□□□□ 0.44
LSM5-204ENST00000409909 SRRM3A6NNA2 597 aaPredicted RBP17.78■□□□□ 0.44
LSM5-204ENST00000409909 SOCS5O75159 536 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 ELFN1P0C7U0 828 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 ALPPL2P10696 532 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 ARHGAP25P42331 645 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 PEX5P50542 639 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 DAB2P98082 770 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 C1orf61Q13536 156 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 PTPRRQ15256 657 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 DEFB133Q30KQ1 61 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 HS1BP3Q53T59 392 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 RHOT2Q8IXI1 618 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 PHACTR4Q8IZ21 702 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 BBS5Q8N3I7 341 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 FAM181AQ8N9Y4 354 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 MDM1Q8TC05 714 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 PDCD6IPQ8WUM4 868 aaKnown RBP17.78■□□□□ 0.44
LSM5-204ENST00000409909 RFFLQ8WZ73 363 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 MAML1Q92585 1016 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 TSGA13Q96PP4 275 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 MYLKQ15746 1914 aa17.78■□□□□ 0.44
LSM5-204ENST00000409909 ACACAQ13085 2346 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 MATN3O15232 486 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 PCCBP05166 539 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 JUPP14923 745 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 CCNCP24863 283 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 INSM1Q01101 510 aaPredicted RBP17.77■□□□□ 0.44
LSM5-204ENST00000409909 NFATC4Q14934 902 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 TCEAL1Q15170 157 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 IFI16Q16666 785 aaKnown RBP17.77■□□□□ 0.44
LSM5-204ENST00000409909 PRRT3Q5FWE3 981 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 RALGPS1Q5JS13 557 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 FAXCQ5TGI0 409 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 HES3Q5TGS1 186 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 KCTD16Q68DU8 428 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 PELI3Q8N2H9 469 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 CBARPQ8N350 705 aaPredicted RBP17.77■□□□□ 0.44
LSM5-204ENST00000409909 BTN2A2Q8WVV5 523 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 TSACCQ96A04 125 aaPredicted RBP17.77■□□□□ 0.44
LSM5-204ENST00000409909 COQ10AQ96MF6 247 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 RNF157Q96PX1 679 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 SEMA3CQ99985 751 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 LRRC61Q9BV99 259 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 DUSP23Q9BVJ7 150 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 CLPBQ9H078 707 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 RBSNQ9H1K0 784 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 DTLQ9NZJ0 730 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 SPASTQ9UBP0 616 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 APOBEC3BQ9UH17 382 aaKnown RBP17.77■□□□□ 0.44
LSM5-204ENST00000409909 INTUQ9ULD6 942 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 ASXL3Q9C0F0 2248 aa17.77■□□□□ 0.44
LSM5-204ENST00000409909 A0A1W2PQ67 120 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 LRRD1A4D1F6 860 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 PGLSO95336 258 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 CPP00450 1065 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 PDHA1P08559 390 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 PPARDQ03181 441 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 TARDBPQ13148 414 aaKnown RBP eCLIP17.76■□□□□ 0.43
LSM5-204ENST00000409909 MTM1Q13496 603 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 CNGA3Q16281 694 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 ALG11Q2TAA5 492 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 ZFYVE27Q5T4F4 411 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 PROSER1Q86XN7 944 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 PLD5Q8N7P1 536 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 PIH1D2Q8WWB5 315 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 FATE1Q969F0 183 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 FUBP1Q96AE4 644 aaKnown RBP17.76■□□□□ 0.43
LSM5-204ENST00000409909 SLC13A1Q9BZW2 595 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 CCDC86Q9H6F5 360 aaKnown RBP17.76■□□□□ 0.43
LSM5-204ENST00000409909 RBM22Q9NW64 420 aaKnown RBP eCLIP17.76■□□□□ 0.43
LSM5-204ENST00000409909 PHTF1Q9UMS5 762 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 HYOU1Q9Y4L1 999 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 RAI2Q9Y5P3 530 aa17.76■□□□□ 0.43
LSM5-204ENST00000409909 LRP4O75096 1905 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 A0A0U1RQS6 177 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 NPIPB15A6NHN6 443 aaPredicted RBP17.75■□□□□ 0.43
LSM5-204ENST00000409909 LMO7DNF2Z398 122 aa17.75■□□□□ 0.43
LSM5-204ENST00000409909 TPP1O14773 563 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms