RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 CTPS1P17812 591 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 IVDP26440 423 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 VIPR1P32241 457 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 CHRNA4P43681 627 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 FAM193AP78312 1265 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 RALGDSQ12967 914 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 SPARCL1Q14515 664 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 TMEM52BQ4KMG9 183 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 DENND5AQ6IQ26 1287 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 PCGF5Q86SE9 256 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 SLC25A41Q8N5S1 370 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 NOA1Q8NC60 698 aaKnown RBP16.69■□□□□ 0.26
SUMO1-208ENST00000409627 CPT1BQ92523 772 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 RAB17Q9H0T7 212 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 PCED1AQ9H1Q7 454 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 B4GALT6Q9UBX8 382 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 GGT7Q9UJ14 662 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 TPX2Q9ULW0 747 aaKnown RBP16.69■□□□□ 0.26
SUMO1-208ENST00000409627 ITM2BQ9Y287 266 aa16.69■□□□□ 0.26
SUMO1-208ENST00000409627 SCN8AQ9UQD0 1980 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 NPIPB15A6NHN6 443 aaPredicted RBP16.68■□□□□ 0.26
SUMO1-208ENST00000409627 EFCAB8A8MWE9 144 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 H0Y858 1186 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 NEMP1O14524 444 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 LILRB5O75023 590 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 NDUFS2O75306 463 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 USP12O75317 370 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 ALPIP09923 528 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 ITIH2P19823 946 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 HNF1BP35680 557 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 OLIG2Q13516 323 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 SYCP2LQ5T4T6 812 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 RNASEH2BQ5TBB1 312 aaKnown RBP16.68■□□□□ 0.26
SUMO1-208ENST00000409627 KIAA1161Q6NSJ0 714 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 HOOK3Q86VS8 718 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 TRIM69Q86WT6 500 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 PPIL6Q8IXY8 311 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 SNF8Q96H20 258 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 APOL2Q9BQE5 337 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 ERP44Q9BS26 406 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 LRRC1Q9BTT6 524 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 GPR174Q9BXC1 333 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 MAGEE1Q9HCI5 957 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 INVSQ9Y283 1065 aa16.68■□□□□ 0.26
SUMO1-208ENST00000409627 TBC1D3DA0A087WVF3 549 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TBC1D3IA0A087WXS9 549 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TBC1D3EA0A087X179 549 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TBC1D3KA0A087X1G2 549 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TCRBV7S3A2A0A539 114 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TBC1D3FA6NER0 549 aaPredicted RBP16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TBC1D3LB9A6J9 549 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 NDC80O14777 642 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 HRO43593 1189 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TMEM63AO94886 807 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TBC1D3HP0C7X1 549 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 ZNF30P17039 623 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 BCKDHBP21953 392 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 LHCGRP22888 699 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 MRPS25P82663 173 aaKnown RBP16.67■□□□□ 0.26
SUMO1-208ENST00000409627 RPL6Q02878 288 aaKnown RBP16.67■□□□□ 0.26
SUMO1-208ENST00000409627 CDH17Q12864 832 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 GLE1Q53GS7 698 aaKnown RBP16.67■□□□□ 0.26
SUMO1-208ENST00000409627 IZUMO3Q5VZ72 239 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 KIAA0895LQ68EN5 471 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TBC1D3GQ6DHY5 549 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TBC1D3CQ6IPX1 549 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 PPP1R21Q6ZMI0 780 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TBC1D3Q8IZP1 549 aaPredicted RBP16.67■□□□□ 0.26
SUMO1-208ENST00000409627 NAT8LQ8N9F0 302 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 PRSS33Q8NF86 280 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 CADM4Q8NFZ8 388 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 CXorf40AQ8TE69 158 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 SMIM14Q96QK8 99 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 KCNH6Q9H252 994 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 CASS4Q9NQ75 786 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 HACD3Q9P035 362 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 UTP11Q9Y3A2 253 aaKnown RBP16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TNRC6BQ9UPQ9 1833 aaKnown RBP16.67■□□□□ 0.26
SUMO1-208ENST00000409627 THADAQ6YHU6 1953 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 PLXNA2O75051 1894 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 TRPM6Q9BX84 2022 aa16.67■□□□□ 0.26
SUMO1-208ENST00000409627 FAM47DPA6NHR8 397 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 SMAPO00193 183 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 AP3B1O00203 1094 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 PSMD11O00231 422 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 MAP3K13O43283 966 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 RNGTTO60942 597 aaKnown RBP16.66■□□□□ 0.26
SUMO1-208ENST00000409627 SEC31AO94979 1220 aaKnown RBP16.66■□□□□ 0.26
SUMO1-208ENST00000409627 HEXIM1O94992 359 aaKnown RBP16.66■□□□□ 0.26
SUMO1-208ENST00000409627 PCDH8O95206 1070 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 ELFN1P0C7U0 828 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 CCR5P51681 352 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 TERF1P54274 439 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 PPP2CBP62714 309 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 RPS21P63220 83 aaKnown RBP16.66■□□□□ 0.26
SUMO1-208ENST00000409627 PPP2CAP67775 309 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 SARNPP82979 210 aaKnown RBP16.66■□□□□ 0.26
SUMO1-208ENST00000409627 SEMG2Q02383 582 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 TCF15Q12870 199 aa16.66■□□□□ 0.26
SUMO1-208ENST00000409627 SRSF5Q13243 272 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms