RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ZNF292O60281 2723 aa16.63■□□□□ 0.25
TSPAN4-208ENST00000409531 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 LOC285095A0A1B0GVY8 99 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 PGLSO95336 258 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 NDST3O95803 873 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 CPP00450 1065 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 RHOXF2BP0C7M4 288 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 ACADMP11310 421 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 RPL21P46778 160 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 PSMD8P48556 350 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 PPP1R21Q6ZMI0 780 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 TMEFF1Q8IYR6 380 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 KIAA2013Q8IYS2 634 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 MCUQ8NE86 351 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 NSMCE3Q96MG7 304 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 RHOXF2Q9BQY4 288 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 FICDQ9BVA6 458 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 FRMD8Q9BZ67 464 aaPredicted RBP16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 EPB41L5Q9HCM4 733 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 USP36Q9P275 1121 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 DMGDHQ9UI17 866 aaKnown RBP16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 ANAPC5Q9UJX4 755 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 PHTF1Q9UMS5 762 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 CYP8B1Q9UNU6 501 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 CHKBQ9Y259 395 aa16.62■□□□□ 0.25
TSPAN4-208ENST00000409531 TSPAN11A1L157 253 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 FZD6O60353 706 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 FGF1P05230 155 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 XPAP23025 273 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 OXTRP30559 389 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 SLC8A1P32418 973 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 ADRA1AP35348 466 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 GRIA4P48058 902 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 DHPSP49366 369 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 TPMTP51580 245 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 SUOXP51687 545 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 ITGA8P53708 1063 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 RPS14P62263 151 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 RPL6Q02878 288 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 IHHQ14623 411 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 SLC1A5Q15758 541 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 CSRP2Q16527 193 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 KCTD19Q17RG1 926 aaPredicted RBP16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 RANBP10Q6VN20 620 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 KDELC2Q7Z4H8 507 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 IFT20Q8IY31 132 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 NAT8LQ8N9F0 302 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 VOPP1Q96AW1 172 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 RMDN1Q96DB5 314 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 TRIB3Q96RU7 358 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 SRPK1Q96SB4 655 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 ARNT2Q9HBZ2 717 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 XAB2Q9HCS7 855 aaKnown RBP16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 PARD6AQ9NPB6 346 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 SEMA4GQ9NTN9 838 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 SARDHQ9UL12 918 aa16.61■□□□□ 0.25
TSPAN4-208ENST00000409531 C16orf96A6NNT2 1141 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 ANKRD66B4E2M5 251 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 MID1O15344 667 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 PRLP01236 227 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 IGLV3-19P01714 112 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 PDHA1P08559 390 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 CD6P30203 668 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 NEK3P51956 506 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 TERF1P54274 439 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 CREB5Q02930 508 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 CDH17Q12864 832 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 SPARCL1Q14515 664 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 SYCP2LQ5T4T6 812 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 HIBCHQ6NVY1 386 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 FBXL19Q6PCT2 694 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 ERN2Q76MJ5 926 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 ERMP1Q7Z2K6 904 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 DNAAF3Q8N9W5 541 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 LPCAT1Q8NF37 534 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 RAB7BQ96AH8 199 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 HDAC8Q9BY41 377 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 PABPC3Q9H361 631 aaKnown RBP16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 CD93Q9NPY3 652 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 WSB2Q9NYS7 404 aaPredicted RBP16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 NCKAP1Q9Y2A7 1128 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 CACNA1AO00555 2505 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 GON4LQ3T8J9 2241 aa16.6■□□□□ 0.25
TSPAN4-208ENST00000409531 UPK3BL1B0FP48 263 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 BHMG1C9JSJ3 638 aaPredicted RBP16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 UPK3BL2E5RIL1 263 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 FOXD2O60548 495 aaPredicted RBP16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 NDUFS2O75306 463 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 AGTP01019 485 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 ZNF806P0C7X5 589 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 MLNP12872 115 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 MPLP40238 635 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 PTGER3P43115 390 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 ID4P47928 161 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 CUL1Q13616 776 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 UGP2Q16851 508 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 SIRPB2Q5JXA9 342 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 PLA2G2CQ5R387 149 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 ANKRD22Q5VYY1 191 aa16.59■□□□□ 0.25
TSPAN4-208ENST00000409531 LRRC8BQ6P9F7 803 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms