RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 GGT7Q9UJ14 662 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 RAB21Q9UL25 225 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 FZD10Q9ULW2 581 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 ZFR2Q9UPR6 939 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 PCDHB9Q9Y5E1 797 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 IKBKGQ9Y6K9 419 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 ATMQ13315 3056 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 IGSF10Q6WRI0 2623 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 TP53BP1Q12888 1972 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 A0A1B0GTQ1 180 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 ANKRD62A6NC57 917 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 TLR4O00206 839 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 DDX3XO00571 662 aaKnown RBP eCLIP9.8□□□□□ -0.847e-8■■■■□ 19.5
NIF3L1-202ENST00000409020 SLC31A1O15431 190 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 SLC7A4O43246 635 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 SPINT1O43278 529 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 RAMP2O60895 175 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 TNFAIP3P21580 790 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 MAPKAPK2P49137 400 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 CLDN6P56747 220 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 CLDN2P57739 230 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 ETF1P62495 437 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 BNIP3Q12983 259 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 ZNF284Q2VY69 593 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 SMUG1Q53HV7 270 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 CARD16Q5EG05 197 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 LRRC73Q5JTD7 316 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 BEND6Q5SZJ8 279 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 NAPEPLDQ6IQ20 393 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 RETSATQ6NUM9 610 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 DCUN1D2Q6PH85 259 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 ZNF783Q6ZMS7 281 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 PARS2Q7L3T8 475 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 TRIM69Q86WT6 500 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 LMNTD2Q8IXW0 634 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 TMIEQ8NEW7 156 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 GABPB2Q8TAK5 448 aaPredicted RBP9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 HMCESQ96FZ2 354 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 CNPY3Q9BT09 278 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 CAPS2Q9BXY5 557 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 ZDHHC6Q9H6R6 413 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 ZFATQ9P243 1243 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 MYO1AQ9UBC5 1043 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 RALYQ9UKM9 306 aaKnown RBP9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 PCDHGB2Q9Y5G2 931 aa9.8□□□□□ -0.84
NIF3L1-202ENST00000409020 A0A1W2PQC6 194 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 USP27XA6NNY8 438 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 FLRT2O43155 660 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 SDC3O75056 442 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 PROS1P07225 676 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 NUDT7P0C024 238 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 TCF4P15884 667 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 ITIH2P19823 946 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 ENPP1P22413 925 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 EPHB2P29323 1055 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 MAP7Q14244 749 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 FGL2Q14314 439 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 POLD3Q15054 466 aaPredicted RBP9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 WHAMMP3Q1A5X7 153 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 CCDC157Q569K6 752 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 EFHC2Q5JST6 749 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 PLEKHA7Q6IQ23 1121 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 CYP4V2Q6ZWL3 525 aaPredicted RBP9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 ERN2Q76MJ5 926 aaKnown RBP9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 NANOGNBQ7Z5D8 188 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 GLRX5Q86SX6 157 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 SLC7A5P1Q8MH63 180 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 SLC22A18ASQ8N1D0 253 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 PCDH20Q8N6Y1 951 aaKnown RBP9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 TMEM145Q8NBT3 493 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 SAP25Q8TEE9 199 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 MAIP1Q8WWC4 291 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 ZNF653Q96CK0 615 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 LRRC45Q96CN5 670 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 EXOC2Q96KP1 924 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 HDAC8Q9BY41 377 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 CEP44Q9C0F1 390 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 CCDC68Q9H2F9 335 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 PREBQ9HCU5 417 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 GALNT8Q9NY28 637 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 AIPL1Q9NZN9 384 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 DKK3Q9UBP4 350 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 PCSK1NQ9UHG2 260 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 C15orf41Q9Y2V0 281 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 NEUROG3Q9Y4Z2 214 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 MGAQ8IWI9 3026 aa9.79□□□□□ -0.84
NIF3L1-202ENST00000409020 CHD5Q8TDI0 1954 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 RAD51BO15315 384 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 INSIG1O15503 277 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 PCDHGA12O60330 932 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 DKK1O94907 266 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 SERPINC1P01008 464 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 FTLP02792 175 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 PRNPP04156 253 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 ADRB3P13945 408 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 PSMA2P25787 234 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 EPHA8P29322 1005 aaPredicted RBP9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 L1CAMP32004 1257 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 PBX1P40424 430 aa9.78□□□□□ -0.84
NIF3L1-202ENST00000409020 GRK6P43250 576 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms