RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 NR0B2Q15466 257 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 ASTE1Q2TB18 679 aaPredicted RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 C5orf22Q49AR2 442 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 ACBD5Q5T8D3 534 aaPredicted RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 TTC39BQ5VTQ0 682 aaPredicted RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 KYAT3Q6YP21 454 aaKnown RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 USP53Q70EK8 1073 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 H2AFVQ71UI9 128 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 ERN2Q76MJ5 926 aaKnown RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 PTAR1Q7Z6K3 402 aaPredicted RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 PARGQ86W56 976 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 DCP2Q8IU60 420 aaKnown RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 RBFAQ8N0V3 343 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 CCDC185Q8N715 623 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 CTNNBL1Q8WYA6 563 aaPredicted RBP6.28□□□□□ -1.4
RPA3-204ENST00000406109 ARHGEF26Q96DR7 871 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 BTBD6Q96KE9 485 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 PSMG3-AS1Q96PY0 264 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 PPP1R9BQ96SB3 815 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 CCDC3Q9BQI4 270 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 NUP85Q9BW27 656 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 PACSIN1Q9BY11 444 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 SLC17A9Q9BYT1 436 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 TRIM7Q9C029 511 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 CLPBQ9H078 707 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 NCKIPSDQ9NZQ3 722 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 MPP6Q9NZW5 540 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 CTTNBP2NLQ9P2B4 639 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 OR12D3Q9UGF7 316 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 PCSK1NQ9UHG2 260 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 IP6K2Q9UHH9 426 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 TBC1D30Q9Y2I9 924 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 WASF2Q9Y6W5 498 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 ESPL1Q14674 2120 aa6.28□□□□□ -1.4
RPA3-204ENST00000406109 A0A1W2PQM1 296 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 TMEM110-MUSTN1A8MSY1 372 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 LMO7DNF2Z398 122 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 FAM72CH0Y354 149 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 MYO1FO00160 1098 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 KPNA3O00505 521 aaPredicted RBP6.27□□□□□ -1.41
RPA3-204ENST00000406109 NVLO15381 856 aaKnown RBP6.27□□□□□ -1.41
RPA3-204ENST00000406109 YY2O15391 372 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 DAPK3O43293 454 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 CREB3O43889 395 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 BNIP3LO60238 219 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 CLDN11O75508 207 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 LEFTY1O75610 366 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 PCDH8O95206 1070 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 RHOCP08134 193 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 CELA2BP08218 269 aaPredicted RBP6.27□□□□□ -1.41
RPA3-204ENST00000406109 MIPP30301 263 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 OR1E1P30953 314 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 MAGEA1P43355 309 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 RABIFP47224 123 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 CDH4P55283 916 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 OXCT1P55809 520 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 PFN3P60673 137 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 RPS21P63220 83 aaKnown RBP6.27□□□□□ -1.41
RPA3-204ENST00000406109 C1orf61Q13536 156 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 PDE1CQ14123 709 aaPredicted RBP6.27□□□□□ -1.41
RPA3-204ENST00000406109 PIGHQ14442 188 aaPredicted RBP6.27□□□□□ -1.41
RPA3-204ENST00000406109 SPA17Q15506 151 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 IGFBP7Q16270 282 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 ALFQ53S48 1182 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 EFHC2Q5JST6 749 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 FAM72AQ5TYM5 149 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 FAM72DQ6L9T8 149 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 DPY19L3Q6ZPD9 716 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 TFAP2DQ7Z6R9 452 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 VASH2Q86V25 355 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 FAM72BQ86X60 149 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 DTX1Q86Y01 620 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 ZNF683Q8IZ20 524 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 PYROXD2Q8N2H3 581 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 FBXO39Q8N4B4 442 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 ARFGAP1Q8N6T3 406 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 SLC35G2Q8TBE7 412 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 FAM174AQ8TBP5 190 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 LMX1AQ8TE12 382 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 CENPTQ96BT3 561 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 LENG8Q96PV6 779 aaPredicted RBP6.27□□□□□ -1.41
RPA3-204ENST00000406109 PANX2Q96RD6 677 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 NCAPGQ9BPX3 1015 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 SPON2Q9BUD6 331 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 LRRC61Q9BV99 259 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 C1QTNF2Q9BXJ5 285 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 FOXP3Q9BZS1 431 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 ZYG11BQ9C0D3 744 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 MUC3BQ9H195 1237 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 SLC25A18Q9H1K4 315 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 EPN3Q9H201 632 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 GEMIN8Q9NWZ8 242 aaKnown RBP6.27□□□□□ -1.41
RPA3-204ENST00000406109 IMPACTQ9P2X3 320 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 VPS51Q9UID3 782 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 SLC25A13Q9UJS0 675 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 ANAPC7Q9UJX3 599 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 FZD10Q9ULW2 581 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 NENFQ9UMX5 172 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 MAN2B2Q9Y2E5 1009 aa6.27□□□□□ -1.41
RPA3-204ENST00000406109 FADS3Q9Y5Q0 445 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms