RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 ANXA9O76027 345 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 HNRNPLP14866 589 aaKnown RBP eCLIP19.94■□□□□ 0.78
CCDC47-202ENST00000403162 CCNCP24863 283 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 LRPAP1P30533 357 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 HACD2Q6Y1H2 254 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 GPRIN1Q7Z2K8 1008 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 HERC6Q8IVU3 1022 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 NUP93Q8N1F7 819 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 CCT7Q99832 543 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 TKTL2Q9H0I9 626 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 SEMA6AQ9H2E6 1030 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 AGO3Q9H9G7 860 aaKnown RBP19.94■□□□□ 0.78
CCDC47-202ENST00000403162 EML4Q9HC35 981 aaKnown RBP19.94■□□□□ 0.78
CCDC47-202ENST00000403162 CRTAC1Q9NQ79 661 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 GALNT8Q9NY28 637 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 GMEB1Q9Y692 573 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 SQORQ9Y6N5 450 aa19.94■□□□□ 0.78
CCDC47-202ENST00000403162 A0A1B0GTW7 788 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 PRORSD1PA6NEY8 169 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 GPR182O15218 404 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 COL6A1P12109 1028 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 PFKPQ01813 784 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 LPIN1Q14693 890 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 CYTH1Q15438 398 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 TECRLQ5HYJ1 363 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 UBXN11Q5T124 520 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 FAM45BPQ6NSW5 357 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 C8orf82Q6P1X6 216 aaPredicted RBP19.93■□□□□ 0.78
CCDC47-202ENST00000403162 FAM45AQ8TCE6 357 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 USP33Q8TEY7 942 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 PNPLA3Q9NST1 481 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 RSL24D1Q9UHA3 163 aaKnown RBP19.93■□□□□ 0.78
CCDC47-202ENST00000403162 H3BNH8 94 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 SNRPB2P08579 225 aaKnown RBP19.93■□□□□ 0.78
CCDC47-202ENST00000403162 USP17L7P0C7H9 530 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 PAMP19021 973 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 CD52P31358 61 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 RABGGTBP53611 331 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 GALNT1Q10472 559 aaPredicted RBP19.93■□□□□ 0.78
CCDC47-202ENST00000403162 TRIM60Q495X7 471 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 AGKQ53H12 422 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 FAM35AQ86V20 835 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 GAB3Q8WWW8 586 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 PBXIP1Q96AQ6 731 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 SGF29Q96ES7 293 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 PAWRQ96IZ0 340 aaKnown RBP19.93■□□□□ 0.78
CCDC47-202ENST00000403162 EFHD1Q9BUP0 239 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 UNKQ9C0B0 810 aaKnown RBP19.93■□□□□ 0.78
CCDC47-202ENST00000403162 TREX1Q9NSU2 369 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 TMEM181Q9P2C4 612 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 MYRFQ9Y2G1 1151 aa19.93■□□□□ 0.78
CCDC47-202ENST00000403162 COL4A4P53420 1690 aaPredicted RBP19.92■□□□□ 0.78
CCDC47-202ENST00000403162 NEMP2A6NFY4 417 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 CSPG5O95196 566 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 MT-CYBP00156 380 aaPredicted RBP19.92■□□□□ 0.78
CCDC47-202ENST00000403162 ADRA1AP35348 466 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 CDK9P50750 372 aaKnown RBP19.92■□□□□ 0.78
CCDC47-202ENST00000403162 SLC12A2P55011 1212 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 TUBA4AP68366 448 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 BFSP2Q13515 415 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 FAM83EQ2M2I3 478 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 MTX3Q5HYI7 312 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 SAMD4BQ5PRF9 694 aaKnown RBP19.92■□□□□ 0.78
CCDC47-202ENST00000403162 C6orf10Q5SRN2 563 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 TWF2Q6IBS0 349 aaKnown RBP19.92■□□□□ 0.78
CCDC47-202ENST00000403162 KIAA0930Q6ICG6 404 aaPredicted RBP19.92■□□□□ 0.78
CCDC47-202ENST00000403162 BHLHA9Q7RTU4 235 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 ERI1Q8IV48 349 aaKnown RBP19.92■□□□□ 0.78
CCDC47-202ENST00000403162 TRIML2Q8N7C3 387 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 ZMIZ2Q8NF64 920 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 IPMKQ8NFU5 416 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 SLC25A23Q9BV35 468 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 FICDQ9BVA6 458 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 C11orf49Q9H6J7 331 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 GLOD4Q9HC38 313 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 SLC2A6Q9UGQ3 507 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 PADI3Q9ULW8 664 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.92■□□□□ 0.78
CCDC47-202ENST00000403162 SNX13Q9Y5W8 968 aa19.92■□□□□ 0.78
CCDC47-202ENST00000403162 IPO13O94829 963 aaKnown RBP19.91■□□□□ 0.78
CCDC47-202ENST00000403162 CPB1P15086 417 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 GEMP55040 296 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 RALGDSQ12967 914 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 ZNF470Q6ECI4 717 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 TRAF7Q6Q0C0 670 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 ANKRD33Q7Z3H0 272 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 PTAR1Q7Z6K3 402 aaPredicted RBP19.91■□□□□ 0.78
CCDC47-202ENST00000403162 CUZD1Q86UP6 607 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.91■□□□□ 0.78
CCDC47-202ENST00000403162 HM13Q8TCT9 377 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 TRPC4APQ8TEL6 797 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 PPP1R2P1Q96PQ5 205 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 IL12RB2Q99665 862 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 TMEM79Q9BSE2 394 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 ANKRD60Q9BZ19 345 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 TNFRSF12AQ9NP84 129 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 OLAHQ9NV23 265 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 CCDC167Q9P0B6 97 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 FBXO5Q9UKT4 447 aa19.91■□□□□ 0.78
CCDC47-202ENST00000403162 CNOT6Q9ULM6 557 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms