RNA–Protein interactions for RNA: ENST00000399100.6

SEC24B-202, Transcript of SEC24 homolog B, COPII coat complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEC24B, Length 3,780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24B-202ENST00000399100 PABPC1LQ4VXU2 614 aaKnown RBP13.19□□□□□ -0.3
SEC24B-202ENST00000399100 TWF2Q6IBS0 349 aaKnown RBP13.19□□□□□ -0.3
SEC24B-202ENST00000399100 RHEBL1Q8TAI7 183 aa13.19□□□□□ -0.3
SEC24B-202ENST00000399100 C3orf30Q96M34 536 aa13.19□□□□□ -0.3
SEC24B-202ENST00000399100 DDX50Q9BQ39 737 aaKnown RBP13.19□□□□□ -0.3
SEC24B-202ENST00000399100 FICDQ9BVA6 458 aa13.19□□□□□ -0.3
SEC24B-202ENST00000399100 NUF2Q9BZD4 464 aa13.19□□□□□ -0.3
SEC24B-202ENST00000399100 RGS18Q9NS28 235 aa13.19□□□□□ -0.3
SEC24B-202ENST00000399100 IKZF3Q9UKT9 509 aa13.19□□□□□ -0.3
SEC24B-202ENST00000399100 KIF26AQ9ULI4 1882 aaPredicted RBP13.18□□□□□ -0.3
SEC24B-202ENST00000399100 C7orf72A4D263 438 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 IPO13O94829 963 aaKnown RBP13.18□□□□□ -0.3
SEC24B-202ENST00000399100 VAPBO95292 243 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CRTAMO95727 393 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CNGA3Q16281 694 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 NADSYN1Q6IA69 706 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 SLC43A3Q8NBI5 491 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 ATXN7L3BQ96GX2 97 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 FAM210AQ96ND0 272 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 ZNF639Q9UID6 485 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 EIF4E1BA6NMX2 242 aaKnown RBP13.18□□□□□ -0.3
SEC24B-202ENST00000399100 STMN1P16949 149 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 RHOQP17081 205 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CR2P20023 1033 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CACNB2Q08289 660 aaPredicted RBP13.18□□□□□ -0.3
SEC24B-202ENST00000399100 MBTPS1Q14703 1052 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 PDK3Q15120 406 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CCDC6Q16204 474 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 NOMO2Q5JPE7 1267 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 MED10Q9BTT4 135 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 RETREG1Q9H6L5 497 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 MARCH4Q9P2E8 410 aaPredicted RBP13.18□□□□□ -0.3
SEC24B-202ENST00000399100 PADI3Q9ULW8 664 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 IQCA1LA6NCM1 817 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 PRORSD1PA6NEY8 169 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CASTOR2A6NHX0 329 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 GFRA2O00451 464 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 MATN4O95460 622 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 AKR1A1P14550 325 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CCR1P32246 355 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CD151P48509 253 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CHN2P52757 468 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 GK3PQ14409 553 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 XKR7Q5GH72 579 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 COQ5Q5HYK3 327 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 PPFIBP2Q8ND30 876 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 PAPD5Q8NDF8 572 aaKnown RBP13.18□□□□□ -0.3
SEC24B-202ENST00000399100 SOCS4Q8WXH5 440 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 FUBP3Q96I24 572 aaKnown RBP eCLIP13.18□□□□□ -0.3
SEC24B-202ENST00000399100 TTC1Q99614 292 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 VCXQ9H320 206 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CATSPERBQ9H7T0 1116 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 HACD3Q9P035 362 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 SFMBT1Q9UHJ3 866 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CPA4Q9UI42 421 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 CDYLQ9Y232 598 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 TLL2Q9Y6L7 1015 aa13.18□□□□□ -0.3
SEC24B-202ENST00000399100 TTC24A2A3L6 582 aaPredicted RBP13.17□□□□□ -0.3
SEC24B-202ENST00000399100 MSI1O43347 362 aaKnown RBP13.17□□□□□ -0.3
SEC24B-202ENST00000399100 MYL3P08590 195 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 WNT3AP56704 352 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 GPNMBQ14956 572 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 SLC5A9Q2M3M2 681 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 SIRPB2Q5JXA9 342 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 CLLU1OSQ5K130 101 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 BNC2Q6ZN30 1099 aaPredicted RBP13.17□□□□□ -0.3
SEC24B-202ENST00000399100 RETREG3Q86VR2 466 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 GOLM1Q8NBJ4 401 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 UNC93B1Q9H1C4 597 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 WDR41Q9HAD4 459 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 SP110Q9HB58 689 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 J3KR12 359 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 TSPAN12O95859 305 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 EPOP01588 193 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 SPATA31D3P0C874 917 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 RHDQ02161 417 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 SQLEQ14534 574 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 PRPSAP1Q14558 356 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 USP10Q14694 798 aaKnown RBP13.17□□□□□ -0.3
SEC24B-202ENST00000399100 POU6F1Q14863 301 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 PPP1R3AQ16821 1122 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 SPATS1Q496A3 300 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 ALFQ53S48 1182 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 SPATA31D4Q6ZUB0 917 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 DNAAF3Q8N9W5 541 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 PPHLN1Q8NEY8 458 aaKnown RBP13.17□□□□□ -0.3
SEC24B-202ENST00000399100 TRMOQ9BU70 441 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 PAPOLBQ9NRJ5 636 aaKnown RBP13.17□□□□□ -0.3
SEC24B-202ENST00000399100 ZNF225Q9UK10 706 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 SCN5AQ14524 2016 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 SLC4A1P02730 911 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 ALDH3B2P48448 385 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 ZNF140P52738 457 aaPredicted RBP13.17□□□□□ -0.3
SEC24B-202ENST00000399100 SERINC3Q13530 473 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 MAPRE1Q15691 268 aaKnown RBP13.17□□□□□ -0.3
SEC24B-202ENST00000399100 MGAT5BQ3V5L5 792 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 ATPAF2Q8N5M1 289 aa13.17□□□□□ -0.3
SEC24B-202ENST00000399100 ANKFN1Q8N957 763 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms