RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 TBC1D3EA0A087X179 549 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TBC1D3KA0A087X1G2 549 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 A0A1W2PQU0 124 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TCRBV7S3A2A0A539 114 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TBC1D3FA6NER0 549 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 LRRC72A6NJI9 287 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 A8MX80 341 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ANKRD66B4E2M5 251 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TBC1D3LB9A6J9 549 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 AP2A1O95782 977 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 EPOP01588 193 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KRT14P02533 472 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TBC1D3HP0C7X1 549 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PIRTP0C851 137 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 HNF1BP35680 557 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 NBL1P41271 181 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GRIA4P48058 902 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 VPS41P49754 854 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CCR5P51681 352 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SUOXP51687 545 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 MRPS25P82663 173 aaKnown RBP12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SFSWAPQ12872 951 aaKnown RBP12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SIM2Q14190 667 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SLC1A5Q15758 541 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CNGA3Q16281 694 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 LPAL2Q16609 132 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 WHAMMP3Q1A5X7 153 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ZNF284Q2VY69 593 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SIRPB2Q5JXA9 342 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TBC1D3GQ6DHY5 549 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TBC1D3CQ6IPX1 549 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CRTC1Q6UUV9 634 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ARMCX6Q7L4S7 300 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 GSTA5Q7RTV2 222 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TRIM69Q86WT6 500 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 HORMAD1Q86X24 394 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TBC1D3Q8IZP1 549 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PDCD7Q8N8D1 485 aaKnown RBP12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 SUMF1Q8NBK3 374 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 CADM4Q8NFZ8 388 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 C1orf216Q8TAB5 229 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KLK6Q92876 244 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 EID2BQ96D98 161 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 LYSMD1Q96S90 227 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PHOX2BQ99453 314 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 KRT12Q99456 494 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 TRIM51Q9BSJ1 452 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 WRAP53Q9BUR4 548 aaKnown RBP12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 PCED1AQ9H1Q7 454 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 RAB6BQ9NRW1 208 aa12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.41
HLA-DQB1-203ENST00000399082 IGLON5A6NGN9 336 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 WNT9AO14904 365 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TTI1O43156 1089 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TSPAN6O43657 245 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MMP20O60882 483 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 NDUFS2O75306 463 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 HEXIM1O94992 359 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FSBPO95073 299 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ECEL1O95672 775 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CA4P22748 312 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 XPAP23025 273 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 IVDP26440 423 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MAOBP27338 520 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MAT2AP31153 395 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 VIPR1P32241 457 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FDFT1P37268 417 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GRIA1P42261 906 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MAGEA6P43360 314 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LIG3P49916 1009 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 POLR2LP62875 67 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FAM193AP78312 1265 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LMNB2Q03252 620 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ELP6Q0PNE2 266 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PTK6Q13882 451 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PRPSAP1Q14558 356 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 KCNJ11Q14654 390 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SPDYCQ5MJ68 293 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ANKRD22Q5VYY1 191 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 NEK5Q6P3R8 708 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ZC3H14Q6PJT7 736 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LIPIQ6XZB0 460 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PRR23BQ6ZRT6 265 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 RFLNAQ6ZTI6 216 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ZNF534Q76KX8 674 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CEP68Q76N32 757 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LPCAT2Q7L5N7 544 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 C11orf74Q86VG3 221 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 JAMLQ86YT9 394 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 DNASE2BQ8WZ79 361 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ATOH1Q92858 354 aaPredicted RBP12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 IFT43Q96FT9 208 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TBL1YQ9BQ87 522 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 C1QTNF2Q9BXJ5 285 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ARNT2Q9HBZ2 717 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SMG5Q9UPR3 1016 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 COQ6Q9Y2Z9 468 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 AAR2Q9Y312 384 aaKnown RBP12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 HCN4Q9Y3Q4 1203 aa12.45□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GON4LQ3T8J9 2241 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms