RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 RNF39Q9H2S5 420 aa14.28□□□□□ -0.12
PCDHGA11-201ENST00000398587 TBC1D30Q9Y2I9 924 aa14.28□□□□□ -0.12
PCDHGA11-201ENST00000398587 FOXO6A8MYZ6 492 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 KRT36O76013 467 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 ABCB1P08183 1280 aaPredicted RBP14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 POU1F1P28069 291 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 DSC2Q02487 901 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 METTL21CQ5VZV1 264 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 TMEM26Q6ZUK4 368 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 NAT8LQ8N9F0 302 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 UBE2E3Q969T4 207 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 TADA1Q96BN2 335 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 ARL8BQ9NVJ2 186 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 COL2A1P02458 1487 aaPredicted RBP14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 KCNH1O95259 989 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 SULT2A1Q06520 285 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 CRHR2Q13324 411 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 TCEAL1Q15170 157 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 MAPKAPK3Q16644 382 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 SERPINA13PQ6UXR4 307 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 CUZD1Q86UP6 607 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 IFNL1Q8IU54 200 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 ZDHHC13Q8IUH4 622 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 ULK2Q8IYT8 1036 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 MAB21L3Q8N8X9 362 aa14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 TRMT13Q9NUP7 481 aaKnown RBP14.27□□□□□ -0.12
PCDHGA11-201ENST00000398587 IPO13O94829 963 aaKnown RBP14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 PTDSS1P48651 473 aaKnown RBP14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 INCA1Q0VD86 236 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 BNIP1Q12981 228 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 MPPE1Q53F39 396 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 DOK6Q6PKX4 331 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 CRYGNQ8WXF5 182 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 PTCD3Q96EY7 689 aaKnown RBP14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 HAPLN3Q96S86 360 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 LPIN3Q9BQK8 851 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 ADPRHL2Q9NX46 363 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 GDAP2Q9NXN4 497 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 TMEM216Q9P0N5 145 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 CFAP97Q9P2B7 532 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 BTRCQ9Y297 605 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 RAI2Q9Y5P3 530 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 NUP98P52948 1817 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 C1QTNF3-AMACRE9PGA6 284 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 IRAK2O43187 625 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 CDH4P55283 916 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 PPM1JQ5JR12 505 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 TJAP1Q5JTD0 557 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 RFWD3Q6PCD5 774 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 FAM151BQ6UXP7 276 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 CERS6Q6ZMG9 384 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 CACUL1Q86Y37 369 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 TERB1Q8NA31 727 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 NPLOC4Q8TAT6 608 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 SLC35F5Q8WV83 523 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 DDX1Q92499 740 aaKnown RBP14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 MAGEB10Q96LZ2 347 aaPredicted RBP14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 TBATAQ96M53 351 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 QRFPRQ96P65 431 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 KLHL28Q9NXS3 571 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 SIX4Q9UIU6 781 aa14.27□□□□□ -0.13
PCDHGA11-201ENST00000398587 FFAR3O14843 346 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 GPR42O15529 346 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 CAPN15O75808 1086 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 EPN2O95208 641 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 METTL18O95568 372 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 MT-CYBP00156 380 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 COX7A2P14406 83 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 CREB1P16220 341 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 RXRGP48443 463 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 TRPC1P48995 793 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 ACLYP53396 1101 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 CAMK1DQ8IU85 385 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 FITM2Q8N6M3 262 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 KCTD13Q8WZ19 329 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 NXNL1Q96CM4 212 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 TBCDQ9BTW9 1192 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 C12orf65Q9H3J6 166 aaKnown RBP14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 PCDHB1Q9Y5F3 818 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 SNX10Q9Y5X0 201 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 SNX8Q9Y5X2 465 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 PPEF2O14830 753 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 IDO1P14902 403 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 TCF4P15884 667 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 MPSTP25325 297 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 PRMT2P55345 433 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 IL5RAQ01344 420 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 IL10RBQ08334 325 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 CCDC85BQ15834 202 aaPredicted RBP14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 SYPL2Q5VXT5 272 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 BANPQ8N9N5 519 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 CXorf40AQ8TE69 158 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 C2orf15Q8WU43 125 aaKnown RBP14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 ABHD8Q96I13 439 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 PCYT2Q99447 389 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 RAD21L1Q9H4I0 556 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 EPS8L2Q9H6S3 715 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 ZFYVE1Q9HBF4 777 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 PRDM4Q9UKN5 801 aa14.26□□□□□ -0.13
PCDHGA11-201ENST00000398587 NCKAP1Q9Y2A7 1128 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms