RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CENPTQ96BT3 561 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 WRAP53Q9BUR4 548 aaKnown RBP14.66□□□□□ -0.06
SEC13-208ENST00000397109 CARD6Q9BX69 1037 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 MAK16Q9BXY0 300 aaKnown RBP14.66□□□□□ -0.06
SEC13-208ENST00000397109 GPR27Q9NS67 375 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 FTSJ1Q9UET6 329 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 AMACRQ9UHK6 382 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 WASF3Q9UPY6 502 aa14.66□□□□□ -0.06
SEC13-208ENST00000397109 TDRD6O60522 2096 aaKnown RBP14.65□□□□□ -0.06
SEC13-208ENST00000397109 GRID2IPA4D2P6 1211 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 TRAFD1O14545 582 aaPredicted RBP14.65□□□□□ -0.06
SEC13-208ENST00000397109 MATN3O15232 486 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 HTRA2O43464 458 aaPredicted RBP14.65□□□□□ -0.06
SEC13-208ENST00000397109 SPOPO43791 374 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 LDOC1O95751 146 aaPredicted RBP14.65□□□□□ -0.06
SEC13-208ENST00000397109 ZFXP17010 805 aaPredicted RBP14.65□□□□□ -0.06
SEC13-208ENST00000397109 CES1P23141 567 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 MMP12P39900 470 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 PFN3P60673 137 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 HNRNPKP61978 463 aaKnown RBP eCLIP14.65□□□□□ -0.06
SEC13-208ENST00000397109 YPEL5P62699 121 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 PTK2BQ14289 1009 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 RAB44Q7Z6P3 723 aaPredicted RBP14.65□□□□□ -0.06
SEC13-208ENST00000397109 ZSWIM9Q86XI8 627 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 PQLC3Q8N755 202 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.65□□□□□ -0.06
SEC13-208ENST00000397109 MAML1Q92585 1016 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 ALG6Q9Y672 507 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 CAPN6Q9Y6Q1 641 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 KNTC1P50748 2209 aa14.65□□□□□ -0.06
SEC13-208ENST00000397109 SPTY2D1-AS1A0A0U1RR47 76 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 CES2O00748 559 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 LZTS3O60299 673 aaPredicted RBP14.64□□□□□ -0.07
SEC13-208ENST00000397109 NEBLO76041 1014 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 COMTP21964 271 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 LIG3P49916 1009 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 LRRC14Q15048 493 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 AGERQ15109 404 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 KANSL1Q7Z3B3 1105 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 DAAM2Q86T65 1068 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 SLCO6A1Q86UG4 719 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 SYCE1Q8N0S2 351 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 SLC22A18ASQ8N1D0 253 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 PGBD5Q8N414 524 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 EID2Q8N6I1 236 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 HDAC11Q96DB2 347 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 SCNM1Q9BWG6 230 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 NOD2Q9HC29 1040 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 NT5MQ9NPB1 228 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 NEUROG3Q9Y4Z2 214 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 GOLGA4Q13439 2230 aaKnown RBP14.64□□□□□ -0.07
SEC13-208ENST00000397109 COL5A1P20908 1838 aaPredicted RBP14.64□□□□□ -0.07
SEC13-208ENST00000397109 CHD8Q9HCK8 2581 aa14.64□□□□□ -0.07
SEC13-208ENST00000397109 CTAGE15A4D2H0 777 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 H3BM21 787 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 ENC1O14682 589 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 PSTPIP1O43586 416 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 HYAL3O43820 417 aaPredicted RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 KRT1P04264 644 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 ATXN1LP0C7T5 689 aaKnown RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 CTAGE8P0CG41 777 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 C6P13671 934 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 DGKAP23743 735 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 IGFALSP35858 605 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 THOP1P52888 689 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 NAP1L1P55209 391 aaKnown RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 MAXP61244 160 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 GBE1Q04446 702 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 ITKQ08881 620 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 PDE1CQ14123 709 aaPredicted RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 FZD2Q14332 565 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 SLC9A4Q6AI14 798 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 DPPA4Q7L190 304 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CTAGE6Q86UF2 777 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 PARGQ86W56 976 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CTAGE4Q8IX94 777 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CHCHD4Q8N4Q1 142 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 TP53I13Q8NBR0 393 aaPredicted RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 CCNYQ8ND76 341 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CNDP2Q96KP4 475 aaKnown RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 POLR1EQ9GZS1 481 aaKnown RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 DNAJC28Q9NX36 388 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 DTLQ9NZJ0 730 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 PHTF1Q9UMS5 762 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 SNX12Q9UMY4 172 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 PCDHGC4Q9Y5F7 938 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CEP295Q9C0D2 2601 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 TTC24A2A3L6 582 aaPredicted RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 NEMP2A6NFY4 417 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 C3orf70A6NLC5 250 aaPredicted RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 APOL1O14791 398 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 PIAS2O75928 621 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 DKK1O94907 266 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CPP00450 1065 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CSF2P04141 144 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 C1SP09871 688 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 ELFN1P0C7U0 828 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CDK4P11802 303 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 KRT10P13645 584 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CCNB1P14635 433 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms